MySQL

GenoMycDB: a database for comparative analysis of mycobacterial genes and genomes

M. Catanho, Mascarenhas, D., Degrave, W., and de Miranda, A. Basílio, GenoMycDB: a database for comparative analysis of mycobacterial genes and genomes, vol. 5, pp. 115-126, 2006.

Several databases and computational tools have been created with the aim of organizing, integrating and analyzing the wealth of information generated by large-scale sequencing projects of mycobacterial genomes and those of other organisms. However, with very few exceptions, these databases and tools do not allow for massive and/or dynamic comparison of these data.

BNDb - Biomolecules Nucleus Database: an integrated proteomics and transcriptomics database

A. C. Faria-Campos, Gomes, R. R., Moratelli, F. S., Rausch-Fernandes, H., Franco, G. R., and Campos, S. V. A., BNDb - Biomolecules Nucleus Database: an integrated proteomics and transcriptomics database, vol. 6. pp. 937-945, 2007.

Proteomics correspond to the identification and quantitative analysis of proteins expressed in different conditions or life stages of a cell or organism. Methods used in proteomics analysis include mainly chromatography, two-dimensional electrophoresis and mass spectrometry. Data generated in proteomics analysis vary significantly, and to identify a protein it is often necessary to perform a series of experiments, comparing its results to those found in proteomics databases.

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