Publications

Avise JC, Arnold J, Ball RM and Bermingham E (1987). Intraspecific phylogeography: The mitochondrial DNA bridge between population genetics and systematics. Annu. Rev. Ecol. Syst. 18: 489-522.   Brito D, Astúa de Moraes D, Lew D and Soriano P (2008). Didelphis aurita IUCN Red List of Threatened Species. Version 2011.1. Available at [http://www.iucnredlist.org]. Accessed July 31, 2011.   Cáceres NC (2002). Food habits and seed dispersal by the white-eared opossum, Didelphis albiventris, in the southern Brazil. Stud. Neotrop. Fauna Environ. 37: 97-104. http://dx.doi.org/10.1076/snfe.37.2.97.8582   Cáceres NC and Monteiro-Filho ELA (1999). Body size in natural populations of Didelphis (Mammalia: Marsupialia) from southern Brazil. Rev. Bras. Biol. 59: 461-469.   Cantor M, Ferreira LA, Silva WR and Setz EZF (2010). Potential seed dispersal by Didelphis albiventris (Marsupialia, Didelphidae) in highly disturbed environment. Biota Neotrop. 10: 45-51. http://dx.doi.org/10.1590/S1676-06032010000200004   Cerqueira R (1985). The distribution of Didelphis in South America (Polyprotodontia, Didelphidae). J. Biogeogr. 12: 135-145. http://dx.doi.org/10.2307/2844837   Cervantes FA, Arcangeli J, Hortelano-Moncada Y and Borisenko AV (2010). DNA barcodes effectively identify the morphologically similar Common Opossum (Didelphis marsupialis) and Virginia Opossum (Didelphis virginiana) from areas of sympatry in Mexico. Mitochondrial DNA 21 (Suppl 1): 44-50. http://dx.doi.org/10.3109/19401736.2010.538051 PMid:21271858   Chiarello AG (2000). Density and population size of mammals in remnants of Brazilian Atlantic Forest. Conserv. Biol. 14: 1649-1657. http://dx.doi.org/10.1046/j.1523-1739.2000.99071.x   Clement M, Posada D and Crandall KA (2000). TCS: a computer program to estimate gene genealogies. Mol. Ecol. 9: 1657-1659. http://dx.doi.org/10.1046/j.1365-294x.2000.01020.x PMid:11050560   Corbet GB and Hill JE (1991). A World List of Mammalian Species. 3rd edn. Oxford University Press, Oxford. PMCid:1002815   Costa L, Astúa de Moraes D, Brito D and Soriano P (2008). Didelphis albiventris IUCN Red List of Threatened Species. Version 2010.4. Available at [http://www.iucnredlist.org]. Accessed July 31, 2011.   Drummond GM, Martins CS, Machado ABM, Sebaio FA, et al. (2005). Biodiversidade em Minas Gerais: Um Atlas para sua Conservação. 2ª ed. Fundação Biodiversitas, Belo Horizonte.   Emmons LH and Feer F (1997). Neotropical Rainforest Mammals: A Field Guide. 2nd edn. The University of Chicago Press, Chicago.   Ewing B and Green P (1998). Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res. 8: 186-194. PMid:9521922   Ewing B, Hillier L, Wendl MC and Green P (1998). Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res. 8: 175-185. PMid:9521921   Folmer O, Black M, Hoeh W, Lutz R, et al. (1994). DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol. Mar. Biol. Biotechnol. 3: 294-299. PMid:7881515   Fundação SOS Mata Atlântica (2011). Fundação SOS Mata Atlântica Web Services. Available at [http://www.sosmatatlantica.org.br]. Accessed July 31, 2011.   Gardner AL (2008). Mammals of South America. Vol. 1: Marsupials, Xenarthrans, Shrews and Bats. The University of Chicago Press, Chicago.   Gentile R and Cerqueira R (1995). Movement patterns of five species of small mammals in a Brazilian restinga. J. Trop. Ecol. 11: 671-677. http://dx.doi.org/10.1017/S0266467400009214   Gordon D, Abajian C and Green P (1998). Consed: a graphical tool for sequence finishing. Genome Res. 8: 195-202. PMid:9521923   Green P (1994). Phrap. Available at [http://www.genome.washington.edu/UWGC/analysistools/phrap.htm]. Accessed July 31, 2011.   Guindon S and Gascuel O (2003). A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52: 696-704. http://dx.doi.org/10.1080/10635150390235520 PMid:14530136   Huelsenbeck JP and Ronquist F (2001). MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754- 755. http://dx.doi.org/10.1093/bioinformatics/17.8.754 PMid:11524383   IBGE (2011). Instituto Brasileiro de Geografia e Estatística Web Services. Available at [http://www.ibge.gov.br]. Accessed July 31, 2011.   Kumar S, Tamura K and Nei M (2007). MEGA4 (Molecular Evolutionary Genetics Analysis). Ver. 4.0. [Computer Software]. Arizona State University, Tempe.   Librado P and Rozas J (2009). DnaSP v5: A software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25: 1451-1452. http://dx.doi.org/10.1093/bioinformatics/btp187 PMid:19346325   Mittermeier RA, Myers N, Thomsen JB and Fonseca GAB (1998). Biodiversity hotspots and major tropical wilderness areas: approaches to setting conservation priorities. Conserv. Biol. 12: 516-520. http://dx.doi.org/10.1046/j.1523-1739.1998.012003516.x   Paglia AP, De Marco P Jr, Costa FM and Pereira RF (1995). Heterogeneidade estrutural e diversidade de pequenos mamíferos em um fragmento de mata secundária de Minas Gerais. Rev. Bras. Zool. 12: 67-79. http://dx.doi.org/10.1590/S0101-81751995000100010   Passamani M (1995). Vertical stratification of small mammals in Atlantic Hill forest. Mammalia 59: 276-279.   Pires AS, Lira PK, Fernandez FAS and Schittini GM (2002). Frequency of movements of small mammals among Atlantic Coastal Forest fragments in Brazil. Biol. Conserv. 108: 229-237. http://dx.doi.org/10.1016/S0006-3207(02)00109-X   Pontes ARM, Normande IC, Fernandes ACA and Ribeiro PFR (2007). Fragmentation causes rarity in common marmosets in the Atlantic forest of northeastern Brazil. Biodivers. Conserv. 16: 1175-1182. http://dx.doi.org/10.1007/s10531-006-9099-5   Sambrook J and Russel DW (2001). Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring.   Schneider S, Roessli D and Excoffier L (2000). ARLEQUIN Version 3.01: A Software for Population Genetic Data Analysis. Genetics and Biometry Laboratory, University of Geneva, Switzerland.   Silva JMC and Tabarelli M (2000). Tree species impoverishment and the future flora of the Atlantic forest of northeast Brazil. Nature 404: 72-74. http://dx.doi.org/10.1038/35003563 PMid:10716443   Sunquist ME, Austad N and Sunquist F (1987). Movement patterns and home range in the common opossum (Didelphis marsupialis). J. Mammal. 68: 173-176. http://dx.doi.org/10.2307/1381069   Swofford D (2002). PAUP*: Phylogenetic Analysis Using Parsimony (and other methods). Computer software. Version 4. Sinauer Associates, Sunderland. PMid:12504223   Varejão JBM and Valle CMC (1982). Contribuição ao estudo da distribuição geográfica do gênero Didelphis (Mammalia: Marsupialia) no Estado de Minas Gerais, Brasil. Lundiana 2: 5-55.   Wilson-Wilde L, Norman J, Robertson J, Sarre S, et al. (2010). Current issues in species identification for forensic science and the validity of using the cytochrome oxidase I (COI) gene. Forensic Sci. Med. Pathol. 6: 233-241. http://dx.doi.org/10.1007/s12024-010-9172-y PMid:20563888   Wilson DE and Reeder DAM (2005). Mammal Species of the World: A Taxonomic and Geographic Reference. Vol. 1. 3rd edn. The Johns Hopkins University Press, Baltimore.

Bindu L, Balaram P, Mathew A, Remani P, et al. (2003). Radiation-induced changes in oral carcinoma cells - a multiparametric evaluation. Cytopathology 14: 287-293. http://dx.doi.org/10.1046/j.1365-2303.2003.00059.x PMid:14510894   Bloching M, Hofmann A, Lautenschlager C, Berghaus A, et al. (2000). Exfoliative cytology of normal buccal mucosa to predict the relative risk of cancer in the upper aerodigestive tract using the MN-assay. Oral Oncol. 36: 550-555. http://dx.doi.org/10.1016/S1368-8375(00)00051-8   Bonassi S, Znaor A, Ceppi M, Lando C, et al. (2007). An increased micronucleus frequency in peripheral blood lymphocytes predicts the risk of cancer in humans. Carcinogenesis 28: 625-631. http://dx.doi.org/10.1093/carcin/bgl177 PMid:16973674   Bonassi S, El-Zein R, Bolognesi C and Fenech M (2011). Micronuclei frequency in peripheral blood lymphocytes and cancer risk: evidence from human studies. Mutagenesis 26: 93-100. http://dx.doi.org/10.1093/mutage/geq075 PMid:21164188   Burgaz S, Coskun E, Demircigil GC, Kocabas NA, et al. (2011). Micronucleus frequencies in lymphocytes and buccal epithelial cells from patients having head and neck cancer and their first-degree relatives. Mutagenesis 26: 351-356. http://dx.doi.org/10.1093/mutage/geq101 PMid:21248276   Cerqueira EMM, Gomes-Filho IS, Trindade S, Lopes MA, et al. (2004). Genetic damage in exfoliated cells from oral mucosa of individuals exposed to X-rays during panoramic dental radiographies. Mutat. Res. 562: 111-117. http://dx.doi.org/10.1016/j.mrgentox.2004.05.008 PMid:15279834   Dumont P, Leu JI, Pietra ACD, George DL, et al. (2003). The codon 72 polymorphic variants of p53 have markedly different apoptotic potential. Nat. Genet. 33: 357-365. http://dx.doi.org/10.1038/ng1093 PMid:12567188   Ezzikouri S, El Feydi AE, Chafik A, Benazzouz M, et al. (2007). The Pro variant of the p53 codon 72 polymorphism is associated with hepatocellular carcinoma in Moroccan population. Hepatol. Res. 37: 748-754. http://dx.doi.org/10.1111/j.1872-034X.2007.00126.x PMid:17573955   Fenech M and Bonassi S (2011). The effect of age, gender, diet and lifestyle on DNA damage measured using micronucleus frequency in human peripheral blood lymphocytes. Mutagenesis 26: 43-49. http://dx.doi.org/10.1093/mutage/geq050 PMid:21164181   Feulgen R and Rossenbeck H (1924). Mikorskopisch-chemischer nachweis einer nucleinsaure von typus der thymonucleisaure und die darauf beruhende elektive farbung vom zellkernen in mikroskopischen praparaten. Z. Phys. Chem. 135: 203-248. http://dx.doi.org/10.1515/bchm2.1924.135.5-6.203   Green DR and Kroemer G (2009). Cytoplasmic functions of the tumour suppressor p53. Nature 458: 1127-1130. http://dx.doi.org/10.1038/nature07986 PMid:19407794 PMCid:2814168   Jianlin L, Jiliang H, Lifen J, Wei Z, et al. (2004). Measuring the genetic damage in cancer patients during radiotherapy with three genetic end-points. Mutagenesis 19: 457-464. http://dx.doi.org/10.1093/mutage/geh057 PMid:15548757   Miller SA, Dykes DD and Polesky HF (1988). A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Res. 16: 1215. http://dx.doi.org/10.1093/nar/16.3.1215 PMid:3344216 PMCid:334765   Norppa H and Falck GC (2003). What do human micronuclei contain? Mutagenesis 18: 221-233. http://dx.doi.org/10.1093/mutage/18.3.221 PMid:12714687   Ramirez A and Saldanha PH (2002). Micronucleus investigation of alcoholic patients with oral carcinomas. Genet. Mol. Res. 1: 246-260. PMid:14963832   Raymond M and Rousset F (1995). GENEPOP (version 1.2) population genetic software for exact tests and ecumenicism. J. Heredity 86: 248-249.   Shidnia H, Crabtree W, Hornback N, Young P, et al. (1990). Micronuclei assay - a predictive variable for tumor response to treatment. Adv. Exp. Med. Biol. 267: 51-55. http://dx.doi.org/10.1007/978-1-4684-5766-7_5 PMid:1965096   Sokal RR and Rohlf FJ (1995). The Normal Probability Distribution. In: Biometry. 3rd edn. W.H. Freeman and Company, New York, 116-123.   Tolbert PE, Shy CM and Allen JW (1992). Micronuclei and other nuclear anomalies in buccal smears: methods development. Mutat. Res. 271: 69-77. http://dx.doi.org/10.1016/0165-1161(92)90033-I   Whibley C, Pharoah PD and Hollstein M (2009). p53 polymorphisms: cancer implications. Nat. Rev. Cancer 9: 95-107. http://dx.doi.org/10.1038/nrc2584 PMid:19165225

Anderson FE (2007). Population genetics of the carinate pillsnail, Euchemotrema hubrichti: genetic structure on a small spatial scale. Conserv. Genet. 8: 965-975. http://dx.doi.org/10.1007/s10592-006-9250-6 Bohonak AJ (1999). Dispersal, gene flow, and population structure. Q. Rev. Biol. 74: 21-45. http://dx.doi.org/10.1086/392950 PMid:10081813 Boore JL, Collins TM, Stanton D, Daehler LL, et al. (1995). Deducing the pattern of arthropod phylogeny from mitochondrial DNA rearrangements. Nature 376: 163-165. http://dx.doi.org/10.1038/376163a0 PMid:7603565 Braband A, Cameron SL, Podsiadlowski L, Daniels SR, et al. (2010a). The mitochondrial genome of the onychophoran Opisthopatus cinctipes (Peripatopsidae) reflects the ancestral mitochondrial gene arrangement of Panarthropoda and Ecdysozoa. Mol. Phylogenet. Evol. 57: 285-292. http://dx.doi.org/10.1016/j.ympev.2010.05.011 PMid:20493270 Braband A, Podsiadlowski L, Cameron SL, Daniels S, et al. (2010b). Extensive duplication events account for multiple control regions and pseudo-genes in the mitochondrial genome of the velvet worm Metaperipatus inae (Onychophora, Peripatopsidae). Mol. Phylogenet. Evol. 57: 293-300. http://dx.doi.org/10.1016/j.ympev.2010.05.012 PMid:20510379 Campiglia S and Lavallard R (1973). Contribution a la biologie de Peripatus acacioi Marcus et Marcus. II. Variations du poids des animaux em fonction du sexe et du nombre des lobopodes. Bol. Zool. Biol. Mar. 30: 499-502. Castelloe J and Templeton AR (1994). Root probabilities for intraspecific gene trees under neutral coalescent theory. Mol. Phylogenet. Evol. 3: 102-113. http://dx.doi.org/10.1006/mpev.1994.1013 PMid:8075830 Clement M, Posada D and Crandall KA (2000). TCS: a computer program to estimate gene genealogies. Mol. Ecol. 9: 1657-1659. http://dx.doi.org/10.1046/j.1365-294x.2000.01020.x PMid:11050560 Conner JK and Hartl DL (2004). A Primer of Ecological Genetics. Sinauer Associates, Sunderland. Crandall KA and Templeton AR (1993). Empirical tests of some predictions from coalescent theory with applications to intraspecific phylogeny reconstruction. Genetics 134: 959-969. PMid:8349118    PMCid:1205530 Ewing B and Green P (1998). Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res. 8: 186-194. PMid:9521922 Ewing B, Hillier L, Wendl MC and Green P (1998). Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res. 8: 175-185. PMid:9521921 Fu YX (1997). Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147: 915-925. PMid:9335623    PMCid:1208208 Gordon D, Abajian C and Green P (1998). Consed: a graphical tool for sequence finishing. Genome Res. 8: 195-202. PMid:9521923 Green P (1994). Phrap. Available at [http://www.genome.washington.edu/UWGC/analysistools/phrap.htm]. Accessed January 10, 2009. Harpending HC (1994). Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution. Hum. Biol. 66: 591-600. PMid:8088750 Irwin DE (2002). Phylogeographic breaks without geographic barriers to gene flow. Evolution 56: 2383-2394. PMid:12583579 Lacorte GA, Oliveira IS and Fonseca CG (2011). Phylogenetic relationships among the Epiperipatus lineages (Onychophora: Peripatidae) from the Minas Gerais State, Brazil. Zootaxa 2755: 57-65. Lavallard R and Campiglia S (1973). Contribution à la Biologie de Peripatus acacioi Marcus et Marcus I. Pourcentage des sexes et variations du nombre des lobopods dans un échantillonnage de plusieurs centaines d’individus. Bol. Zool. Biol. Mar. 30: 483-498. Lavallard R and Campiglia S (1975a). Contribution à la Biologies de Peripatus acacioi Marcus et Marcus (Onychophore). IV. Elevage au laboratoir. Cien. Cult. 27: 549-556. Lavallard R and Campiglia S (1975b). Contribution à la Biologie de Peripatus acaioi Marcus et Marcus (Onychophore). V. Etude des Naissances dans un Elevage de laboratoire. Zool. Anz. Jena. 195: 338-350. Lewinsohn TM, Lucci FAV and Inacio PP (2005). Conservation of terrestrial invertebrates and their habitats in Brazil. Conserv. Biol. 19: 640-645. http://dx.doi.org/10.1111/j.1523-1739.2005.00682.x Librado P and Rozas J (2009). DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25: 1451-1452. http://dx.doi.org/10.1093/bioinformatics/btp187 PMid:19346325 Marcus E and Marcus E (1955). A new Peripatus from Minas Gerais, Brazil. An. Acad. Bras. Cienc. 27: 189-193. Miller MP (2005). Alleles in space (AIS): computer software for the joint analysis of interindividual spatial and genetic information. J. Hered. 96: 722-724. http://dx.doi.org/10.1093/jhered/esi119 PMid:16251514 Monge-Nájera J (1995). Phylogeny, biogeography and reproductive trends in the Onychophora. Zool. J. Linn. Soc. 114: 21-60. http://dx.doi.org/10.1111/j.1096-3642.1995.tb00111.x Moya O, Contreras-Diaz HG, Oromi P and Juan C (2004). Genetic structure, phylogeography and demography of two ground-beetle species endemic to the Tenerife laurel forest (Canary Islands). Mol. Ecol. 13: 3153-3167. http://dx.doi.org/10.1111/j.1365-294x.2004.02316.x PMid:15367128 New TR (1995). Onychophora in invertebrate conservation: priorities, practice and prospects. Zool. J. Linn. Soc. 114: 77-89. http://dx.doi.org/10.1111/j.1096-3642.1995.tb00113.x Newlands G and Ruhberg H (1978). Onychophora. In: Biogeography and Ecology of South Africa (Werger JMA, ed.). The Hague, Junk, 679-684. http://dx.doi.org/10.1007/978-94-009-9951-0_17 Oliveira IS, Wieloch AH and Mayer G (2010). Revised taxonomy and redescription of two species of the Peripatidae (Onychophora) from Brazil: a step towards consistent terminology of morphological characters. Zootaxa 2493: 16-34. Panchal M (2007). The automation of nested clade phylogeographic analysis. Bioinformatics 23: 509-510. http://dx.doi.org/10.1093/bioinformatics/btl614 PMid:17142814 Pedralli G, Freitas VLO, Meyer ST, Teixeira MCB, et al. (1997). Levantamento florístico na Estação Ecológica do Tripuí, Ouro Preto, MG. Acta Bot. Bras. 11: 191-213. Posada D, Crandall KA and Templeton AR (2000). GeoDis: a program for the cladistic nested analysis of the geographical distribution of genetic haplotypes. Mol. Ecol. 9: 487-488. http://dx.doi.org/10.1046/j.1365-294x.2000.00887.x PMid:10736051 Raymond M and Rousset F (1995). An exact test for population differentiation. Evolution 49: 1280-1283. http://dx.doi.org/10.2307/2410454 Reed DH and Frankham R (2003). Correlation between fitness and genetic diversity. Conserv. Biol. 17: 230-237. http://dx.doi.org/10.1046/j.1523-1739.2003.01236.x Sambrook J and Russell DW (2001). Molecular Cloning: A Laboratory Manual. CHSL Press, New York. Schneider S, Roessli D and Excoffier L (2000). ARLEQUIN Ver 3.01: A Software for Population Genetic Data Analysis. Genetics and Biometry Laboratory, University of Geneva, Switzerland. Strasser CA and Barber PH (2009). Limited genetic variation and structure in softshell clams (Mya arenaria) across their native and introduced range. Conserv. Genet. 10: 803-814. http://dx.doi.org/10.1007/s10592-008-9641-y Tait NN and Briscoe DA (1995). Genetic differentiation within New Zealand Onychophora and their relationships to the Australian fauna. Zool. J. Linn. Soc. 114: 103-113. http://dx.doi.org/10.1111/j.1096-3642.1995.tb00115.x Tajima F (1989). Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585-595. PMid:2513255    PMCid:1203831 Tamura K, Dudley J, Nei M and Kumar S (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599. http://dx.doi.org/10.1093/molbev/msm092 PMid:17488738 Templeton AR (2004). Statistical phylogeography: methods of evaluating and minimizing inference errors. Mol. Ecol. 13: 789-809. http://dx.doi.org/10.1046/j.1365-294X.2003.02041.x PMid:15012756

Charlwood JD (1996). Biological variation in Anopheles darlingi Root. Mem. Inst. Oswaldo Cruz 91: 391-398. PMid:9070397   Charlwood JD and Hayes J (1978). Variações geográficas no ciclo de picada do Anopheles darlingi Root no Brasil. Acta Amazon. 8: 601-603.   Conn JE, Bollback JP, Onyabe DY, Tessa NR, et al. (2001). Isolation of polymorphic microsatellite markers from the malaria vector Anopheles darlingi. Mol. Ecol. Notes 1: 223-225. http://dx.doi.org/10.1046/j.1471-8278.2001.00078.x   Conn JE, Vineis JH, Bollback JP, Onyabe DY, et al. (2006). Population structure of the malaria vector Anopheles darlingi in a malaria-endemic region of eastern Amazonian Brazil. Am. J. Trop. Med. Hyg. 74: 798-806. PMid:16687683   Consoli RAGB and Oliveira RL (1994). Principais Mosquitos de Importância Sanitária no Brasil. Fio Cruz, Rio de Janeiro.   Donnelly MJ, Simard F and Lehmann T (2002). Evolutionary studies of malaria vectors. 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(2009). Periodicity of capture of the Anopheles darlingi Root (Diptera: Culicidae) in Porto Velho, Rondônia, Brazil. Neotrop. Entomol. 38: 677-682. http://dx.doi.org/10.1590/S1519-566X2009000500019 PMid:19943019   Gil LH, Tada MS, Katsuragawa TH, Ribolla PE, et al. (2007). Urban and suburban malaria in Rondônia (Brazilian Western Amazon). II. Perennial transmissions with high anopheline densities are associated with human environmental changes. Mem. Inst. Oswaldo Cruz 102: 271-276. http://dx.doi.org/10.1590/S0074-02762007005000013 PMid:17568931   González R, Wilkerson R, Suarez MF, Garcia F, et al. (2007). A population genetics study of Anopheles darlingi (Diptera: Culicidae) from Colombia based on random amplified polymorphic DNA-polymerase chain reaction and amplified fragment length polymorphism markers. Mem. Inst. Oswaldo Cruz 102: 255-262. http://dx.doi.org/10.1590/S0074-02762007005000037 PMid:17568929   Janssen P, Coopman R, Huys G, Swings J, et al. (1996). 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