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2016
deAzevêdo J. Silva, Lima, S. C., Addobbati, C., Moura, R., Brandão, L. A. Cavalcanti, Pancoto, J. A. Trés, Donadi, E. A., Crovella, S., and Sandrin-Garcia, P., Association of interferon-induced helicase C domain (IFIH1) gene polymorphisms with systemic lupus erythematosus and a relevant updated meta-analysis, vol. 15, no. 4, p. -, 2016.
Conflicts of interestThe authors declare no conflict of interest.ACKNOWLEDGMENTSResearch supported by the following Brazilian funding agencies: CAPES (Coordenação de Aperfeiçoamento de Pessoal de Nível Superior), CNPq (Conselho Nacional de Desenvolvimento Científico e Tecnológico), FAPESP (Fundação Amparo à Pesquisa do Estado de São Paulo), and FACEPE (Fundação de Amparo à Ciência e Tecnologia de Pernambuco). REFERENCESBarrett JC, Fry B, Maller J, Daly MJ, et al (2005). Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 21: 263-265. http://dx.doi.org/10.1093/bioinformatics/bth457 Cen H, Leng RX, Wang W, Zhou M, et al (2013a). Association study of IFIH1 rs1990760 polymorphism with systemic lupus erythematosus in a Chinese population. Inflammation 36: 444-448. http://dx.doi.org/10.1007/s10753-012-9564-0 Cen H, Wang W, Leng RX, Wang TY, et al (2013b). Association of IFIH1 rs1990760 polymorphism with susceptibility to autoimmune diseases: a meta-analysis. Autoimmunity 46: 455-462. http://dx.doi.org/10.3109/08916934.2013.796937 Chistiakov DA, et al (2010). Interferon induced with helicase C domain 1 (IFIH1) and virus-induced autoimmunity: a review. Viral Immunol. 23: 3-15. http://dx.doi.org/10.1089/vim.2009.0071 Choubey D, et al (2012). Interferon-inducible Ifi200-family genes as modifiers of lupus susceptibility. Immunol. Lett. 147: 10-17. http://dx.doi.org/10.1016/j.imlet.2012.07.003 Crampton SP, Deane JA, Feigenbaum L, Bolland S, et al (2012). Ifih1 gene dose effect reveals MDA5-mediated chronic type I IFN gene signature, viral resistance, and accelerated autoimmunity. J. Immunol. 188: 1451-1459. http://dx.doi.org/10.4049/jimmunol.1102705 Cunninghame Graham DS, Morris DL, Bhangale TR, Criswell LA, et al (2011). Association of NCF2, IKZF1, IRF8, IFIH1, and TYK2 with systemic lupus erythematosus. PLoS Genet. 7: e1002341. http://dx.doi.org/10.1371/journal.pgen.1002341 Enevold C, Kjær L, Nielsen CH, Voss A, et al (2014). Genetic polymorphisms of dsRNA ligating pattern recognition receptors TLR3, MDA5, and RIG-I. Association with systemic lupus erythematosus and clinical phenotypes. Rheumatol. Int. 34: 1401-1408. http://dx.doi.org/10.1007/s00296-014-3012-4 Faul F, Erdfelder E, Buchner A, Lang A-G, et al (2009). Statistical power analyses using G*Power 3.1: tests for correlation and regression analyses. Behav. Res. Methods 41: 1149-1160. http://dx.doi.org/10.3758/BRM.41.4.1149 Gateva V, Sandling JK, Hom G, Taylor KE, et al (2009). A large-scale replication study identifies TNIP1, PRDM1, JAZF1, UHRF1BP1 and IL10 as risk loci for systemic lupus erythematosus. Nat. Genet. 41: 1228-1233. http://dx.doi.org/10.1038/ng.468 Gono T, Kawaguchi Y, Sugiura T, Furuya T, et al (2010). Interferon-induced helicase (IFIH1) polymorphism with systemic lupus erythematosus and dermatomyositis/polymyositis. Mod. Rheumatol. 20: 466-470. http://dx.doi.org/10.3109/s10165-010-0311-9 González JR, Armengol L, Solé X, Guinó E, et al (2007). SNPassoc: an R package to perform whole genome association studies. Bioinformatics 23: 644-645. http://dx.doi.org/10.1093/bioinformatics/btm025 Guerra SG, Vyse TJ, Cunninghame Graham DS, et al (2012). The genetics of lupus: a functional perspective. Arthritis Res. Ther. 14: 211. http://dx.doi.org/10.1186/ar3844 James JA, Kaufman KM, Farris AD, Taylor-Albert E, et al (1997). An increased prevalence of Epstein-Barr virus infection in young patients suggests a possible etiology for systemic lupus erythematosus. J. Clin. Invest. 100: 3019-3026. http://dx.doi.org/10.1172/JCI119856 Lenert P, et al (2010). Nucleic acid sensing receptors in systemic lupus erythematosus: development of novel DNA- and/or RNA-like analogues for treating lupus. Clin. Exp. Immunol. 161: 208-222. McClain MT, Heinlen LD, Dennis GJ, Roebuck J, et al (2005). Early events in lupus humoral autoimmunity suggest initiation through molecular mimicry. Nat. Med. 11: 85-89. http://dx.doi.org/10.1038/nm1167 Molineros JE, Maiti AK, Sun C, Looger LL, BIOLUPUS Networket al (2013). Admixture mapping in lupus identifies multiple functional variants within IFIH1 associated with apoptosis, inflammation, and autoantibody production. PLoS Genet. 9: e1003222. http://dx.doi.org/10.1371/journal.pgen.1003222 Moura R, Araujo J, Guimarães R, Crovella S, et al (2013). Interferon induced with helicase C domain 1 (IFIH1): trends on helicase domain and type 1 diabetes onset. Gene 516: 66-68. http://dx.doi.org/10.1016/j.gene.2012.11.066 Robinson T, Kariuki SN, Franek BS, Kumabe M, et al (2011). Autoimmune disease risk variant of IFIH1 is associated with increased sensitivity to IFN-α and serologic autoimmunity in lupus patients. J. Immunol. 187: 1298-1303. http://dx.doi.org/10.4049/jimmunol.1100857 Sambrook J, Fritch EF and Maniatis T (1989). Molecular cloning: A laboratory Manual. 2nd edn. Cold Spring Harbor Laboratory Press, New York. Harley JB, Alarcón-Riquelme ME, Criswell LA, Jacob CO, International Consortium for Systemic Lupus Erythematosus Genetics (SLEGEN)et al (2008). Genome-wide association scan in women with systemic lupus erythematosus identifies susceptibility variants in ITGAM, PXK, KIAA1542 and other loci. Nat. Genet. 40: 204-210. http://dx.doi.org/10.1038/ng.81 Smyth DJ, Cooper JD, Bailey R, Field S, et al (2006). A genome-wide association study of nonsynonymous SNPs identifies a type 1 diabetes locus in the interferon-induced helicase (IFIH1) region. Nat. Genet. 38: 617-619. http://dx.doi.org/10.1038/ng1800 Stathopoulou EA, Routsias JG, Stea EA, Moutsopoulos HM, et al (2005). Cross-reaction between antibodies to the major epitope of Ro60 kD autoantigen and a homologous peptide of Coxsackie virus 2B protein. Clin. Exp. Immunol. 141: 148-154. http://dx.doi.org/10.1111/j.1365-2249.2005.02812.x Sutherland A, Davies J, Owen CJ, Vaikkakara S, et al (2007). Genomic polymorphism at the interferon-induced helicase (IFIH1) locus contributes to Graves’ disease susceptibility. J. Clin. Endocrinol. Metab. 92: 3338-3341. http://dx.doi.org/10.1210/jc.2007-0173 Tsokos GC, et al (2011). Systemic lupus erythematosus. N. Engl. J. Med. 365: 2110-2121. http://dx.doi.org/10.1056/NEJMra1100359 Viechtbauer W, et al (2010). Conducting meta-analyses in R with the metafor package. J. Stat. Softw. 36: 1-46. http://dx.doi.org/10.18637/jss.v036.i03 Wang C, Ahlford A, Laxman N, Nordmark G, et al (2013). Contribution of IKBKE and IFIH1 gene variants to SLE susceptibility. Genes Immun. 14: 217-222. http://dx.doi.org/10.1038/gene.2013.9 Zahn S, Barchet W, Rehkämper C, Hornung T, et al (2011). Enhanced skin expression of melanoma differentiation-associated gene 5 (MDA5) in dermatomyositis and related autoimmune diseases. J. Am. Acad. Dermatol. 64: 988-989. http://dx.doi.org/10.1016/j.jaad.2010.08.004 Zhao ZF, Cui B, Chen HY, Wang S, et al (2007). The A946T polymorphism in the interferon induced helicase gene does not confer susceptibility to Graves’ disease in Chinese population. Endocrine 32: 143-147. http://dx.doi.org/10.1007/s12020-007-9024-z  
K. C. N. Rabelo, Albuquerque, C. M. R., Tavares, V. B., Santos, S. M., Souza, C. A., Oliveira, T. C., Moura, R. R., Brandão, L. A. C., Crovella, S., Rabelo, K. C. N., Albuquerque, C. M. R., Tavares, V. B., Santos, S. M., Souza, C. A., Oliveira, T. C., Moura, R. R., Brandão, L. A. C., and Crovella, S., Detecting multiple DNA human profile from a mosquito blood meal, vol. 15, p. -, 2016.
K. C. N. Rabelo, Albuquerque, C. M. R., Tavares, V. B., Santos, S. M., Souza, C. A., Oliveira, T. C., Moura, R. R., Brandão, L. A. C., Crovella, S., Rabelo, K. C. N., Albuquerque, C. M. R., Tavares, V. B., Santos, S. M., Souza, C. A., Oliveira, T. C., Moura, R. R., Brandão, L. A. C., and Crovella, S., Detecting multiple DNA human profile from a mosquito blood meal, vol. 15, p. -, 2016.
A. V. C. Coelho, Moura, R. R., Crovella, S., Celsi, F., Coelho, A. V. C., Moura, R. R., Crovella, S., and Celsi, F., HLA-G genetic variants and hepatocellular carcinoma: a meta-analysis, vol. 15, p. -, 2016.
A. V. C. Coelho, Moura, R. R., Crovella, S., Celsi, F., Coelho, A. V. C., Moura, R. R., Crovella, S., and Celsi, F., HLA-G genetic variants and hepatocellular carcinoma: a meta-analysis, vol. 15, p. -, 2016.
T. C. Oliveira, Santos, A. B. R., Rabelo, K. C. N., Souza, C. A., Santos, S. M., and Crovella, S., Human autosomal DNA and X chromosome STR profiles obtained from Chrysomya albiceps (Diptera: Calliphoridae) larvae used as a biological trace, vol. 15, no. 4, p. -, 2016.
Conflicts of interestThe authors declare no conflict of interest.ACKNOWLEDGMENTSWe thank the Higher Education Coordination of Improvement (CAPES) for funding; all professionals who are part of the Expertise and Research Laboratory for Forensic Genetics of the Social Defense Secretariat of Pernambuco (LPPGF/SDS-PE); and Pedro Rodrigues for the analysis of the X chromosome. REFERENCESAmendt J, Krettek R, Niess C, Zehner R, et al (2000). Forensic entomology in Germany. Forensic Sci. Int. 113: 309-314. http://dx.doi.org/10.1016/S0379-0738(00)00239-5 Applied Biosystems (2009). GeneMapper® ID-X software. Version 1.2. Reference guide, 75. Arnaldos MI, García MD, Romera E, Presa JJ, et al (2005). Estimation of postmortem interval in real cases based on experimentally obtained entomological evidence. Forensic Sci. Int. 149: 57-65. http://dx.doi.org/10.1016/j.forsciint.2004.04.087 Buckleton JS, Triggs CM and Walsh SJ (2005). Forensic DNA evidence interpretation. 1st edn. CRC Press, Boca Raton. Campobasso CP, Linville JG, Wells JD, Introna F, et al (2005). Forensic genetic analysis of insect gut contents. Am. J. Forensic Med. Pathol. 26: 161-165. Carvalho CJB, Mello-Patiu CA, et al (2008). Key to the adults of the most common forensic species of Diptera in South America. Rev. Bras. Entomol. 53: 390-406. http://dx.doi.org/10.1590/S0085-56262008000300012 Carvalho F, Dadour IR, Groth DM, Harvey ML, et al (2005). Isolation and detection of ingested DNA from the immature stages of Calliphora dubia (diptera: Calliphoridae) : A forensically important blowfly. Forensic Sci. Med. Pathol. 1: 261-265. http://dx.doi.org/10.1385/FSMP:1:4:261 de Lourdes Chávez-Briones M, Hernández-Cortés R, Díaz-Torres P, Niderhauser-García A, et al (2013). Identification of human remains by DNA analysis of the gastrointestinal contents of fly larvae. J. Forensic Sci. 58: 248-250. http://dx.doi.org/10.1111/j.1556-4029.2012.02279.x Di Luise E, Magni P, Staiti N, Spitaleri S, et al. (2008). Genotyping of human nuclear DNA recovered from the gut of fly larvae. Forensic Sci. Int. Genet. Suppl. Series 1: 591-592. DiZinno JA, Lord WD, Collins-Morton MB, Wilson MR, et al (2002). Mitochondrial DNA sequencing of beetle larvae (Nitidulidae: Omosita) recovered from human bone. J. Forensic Sci. 47: 1337-1339. http://dx.doi.org/10.1520/JFS15571J Grassberger M, Friedrich E, Reiter C, et al (2003). The blowfly Chrysomya albiceps (Wiedemann) (Diptera: Calliphoridae) as a new forensic indicator in Central Europe. Int. J. Legal Med. 117: 75-81. Guimarães JH, Prado AP, Linhares AX, et al (1978). Three newly introduced blowfly species in Southern Brazil (Diptera: Calliphoridae). Rev. Bras. Entomol. 22: 53-60. Hobson RP, et al (1931). Studies on the nutrition of blow-fly larvae I. Structure and function of the alimentary tract. J. Exp. Biol. 8: 109-123. Kester KM, Toothman MH, Brown BL, StreetWS4thet al (2010). Recovery of environmental human DNA by insects. J. Forensic Sci. 55: 1543-1551. http://dx.doi.org/10.1111/j.1556-4029.2010.01500.x Kondakci GO, Bulbul O, Shahzad MS, Polat E, et al. (2009). STR and SNP analysis of human DNA from Lucilia sericata larvae’s gut contents. Forensic Sci. Int. Genet. Suppl. Series 2: 178-179. Kreike J, Kampfer S, et al (1999). Isolation and characterization of human DNA from mosquitoes (Culicidae). Int. J. Legal Med. 112: 380-382. http://dx.doi.org/10.1007/s004140050018 Li X, Cai JF, Guo YD, Xiong F, et al (2011). Mitochondrial DNA and STR analyses for human DNA from maggots crop contents: a forensic entomology case from central-southern China. Trop. Biomed. 28: 333-338. Linville JG, Hayes J, Wells JD, et al (2004). Mitochondrial DNA and STR analyses of maggot crop contents: effect of specimen preservation technique. J. Forensic Sci. 49: 341-344. http://dx.doi.org/10.1520/JFS2003266 Oliveira TC, Vasconcelos SD, et al (2010). Insects (Diptera) associated with cadavers at the Institute of Legal Medicine in Pernambuco, Brazil: implications for forensic entomology. Forensic Sci. Int. 198: 97-102. http://dx.doi.org/10.1016/j.forsciint.2010.01.011 Oliveira-Costa J, Mello-Patiu CA, et al (2004). Application of forensic entomology to estimate of the postmortem interval (PMI) in homicide investigations by the Rio de Janeiro Police Department in Brazil. Anil Aggrawal 5: 40-44. Riancho JA, Zarrabeitia MT, et al (2003). A Windows-based software for common paternity and sibling analyses. Forensic Sci. Int. 135: 232-234. http://dx.doi.org/10.1016/S0379-0738(03)00217-2 Szibor R, et al (2007). X-chromosomal markers: past, present and future. Forensic Sci. Int. Genet. 1: 93-99. http://dx.doi.org/10.1016/j.fsigen.2007.03.003 Szibor R, Krawczak M, Hering S, Edelmann J, et al (2003). Use of X-linked markers for forensic purposes. Int. J. Legal Med. 117: 67-74. Thyssen PJ (2011). Entomologia forense. In: Entomologia médica e veterinária (Marcondes CB, ed.). 2nd edn. Atheneu, Rio de Janeiro, 129-137. Toni C, Presciuttini S, Spinetti I, Rocchi A, et al (2006). Usefulness of X-chromosome markers in resolving relationships: Report of a court case involving presumed half sisters. Int. Congr. Ser. 128: 301-303. http://dx.doi.org/10.1016/j.ics.2005.09.044 Wang X, Cai JF, Zhong M, Li JB, et al (2009). [Extract human DNA from maggot crop contents by phenol-chloroform method coupled with paramagnetic particle method]. Fa Yi Xue Za Zhi 25: 421-424. Wells JD, Stevens JR, et al (2008). Application of DNA-based methods in forensic entomology. Annu. Rev. Entomol. 53: 103-120. http://dx.doi.org/10.1146/annurev.ento.52.110405.091423 Wells JD, Introna FJrDi VellaG, Campobasso CP, et al (2001). Human and insect mitochondrial DNA analysis from maggots. J. Forensic Sci. 46: 685-687. http://dx.doi.org/10.1520/JFS15022J Zehner R, Amendt J, Krettek R, et al (2004). STR typing of human DNA from fly larvae fed on decomposing bodies. J. Forensic Sci. 49: 337-340. http://dx.doi.org/10.1520/JFS2003248 Ziętkiewicz E, Witt M, Daca P, Żebracka-Gala J, et al (2012). Current genetic methodologies in the identification of disaster victims and in forensic analysis. J. Appl. Genet. 53: 41-60. http://dx.doi.org/10.1007/s13353-011-0068-7  
2015
N. A. C. Tavares, Santos, M. M. S., Moura, R., Araújo, J., Guimarães, R. L., Crovella, S., and Brandão, L. A. C., Association of TNF-α, CTLA4, and PTPN22 polymorphisms with type 1 diabetes and other autoimmune diseases in Brazil, vol. 14, pp. 18936-18944, 2015.
S. M. Santos, Souza, C. A., Rabelo, K. C. N., Souza, P. R. E., Moura, R. R., Oliveira, T. C., and Crovella, S., Distribution of forensic marker allelic frequencies in Pernambuco, Northestern Brazil, vol. 14, pp. 4303-4310, 2015.
C. J. C. Addobbati, J. Silva, deAzevêdo, Tavares, N. A. C., Araújo, J., Guimarães, R. L., Brandão, L., Crovella, S., and Sandrin-Garcia, P., FYB polymorphisms in Brazilian patients with type I diabetes mellitus and autoimmune polyglandular syndrome type III, vol. 14. pp. 29-33, 2015.
deAzevêdo J. Silva, Tavares, N. A. C., Santos, M. M. S., Moura, R., Guimarães, R. L., Araújo, J., Crovella, S., and Brandão, L. A. C., Meta-analysis of STAT4 and IFIH1 polymorphisms in type 1 diabetes mellitus patients with autoimmune polyglandular syndrome type III, vol. 14, pp. 17730-17738, 2015.
A. V. C. Coelho, Moura, R. R., Cavalcanti, C. A. J., Guimarães, R. L., Sandrin-Garcia, P., Crovella, S., and Brandão, L. A. C., A rapid screening of ancestry for genetic association studies in an admixed population from Pernambuco, Brazil, vol. 14, pp. 2876-2884, 2015.
K. C. N. Rabelo, Albuquerque, C. M. R., Tavares, V. B., Santos, S. M., Souza, C. A., Oliveira, T. C., Oliveira, N. C. L., and Crovella, S., Trace samples of human blood in mosquitoes as a forensic investigation tool, vol. 14, pp. 14847-14856, 2015.
R. Mde Albuque Maranhão, Esteves, F. A. Martins, Crovella, S., Segat, L., and Souza, P. R. Eleutério, Tumor necrosis factor-α and interleukin-6 gene polymorphism association with susceptibility to celiac disease in Italian patients, vol. 14, pp. 16343-16352, 2015.
2012
M. F. P. T. Baldez da Silva, Guimarães, V., Silva, M. A. R., Amaral, C. M. Medeiros d, Beçak, W., Stocco, R. C., Freitas, A. C., and Crovella, S., Frequency of human papillomavirus types 16, 18, 31, and 33 and sites of cervical lesions in gynecological patients from Recife, Brazil, vol. 11, pp. 462-466, 2012.
Ault KA (2006). Epidemiology and natural history of human papillomavirus infections in the female genital tract. Infect. Dis. Obstet. Gynecol. 2006: 1-5. http://dx.doi.org/10.1155/IDOG/2006/40470 Baldez da Silva MF, Chagas BS, Guimaraes V, Katz LM, et al. (2009). HPV31 and HPV33 incidence in cervical samples from women in Recife, Brazil. Genet. Mol. Res. 8: 1437-1443. http://dx.doi.org/10.4238/vol8-4gmr677 PMid:20013657 Broomall EM, Reynolds SM and Jacobson RM (2010). Epidemiology, clinical manifestations, and recent advances in vaccination against human papillomavirus. Postgrad. Med. 122: 121-129. http://dx.doi.org/10.3810/pgm.2010.03.2129 PMid:20203463 Castro TM, Peixoto PG, Bussoloti IF, Nascimento VX, et al. (2009). Detecção de HPV na mucosa oral e genital pela técnica PCR em mulheres com diagnóstico histopatológico positivo para HPV genital. Rev. Bras. Otorrinolaringol. 75: 167-171. http://dx.doi.org/10.1590/S0034-72992009000200002 PMid:19575099 Chaturvedi AK (2010). Beyond cervical cancer: burden of other HPV-related cancers among men and women. J. Adolesc. Health 46: S20-S26. http://dx.doi.org/10.1016/j.jadohealth.2010.01.016 PMid:20307840 Derchain SFM and Sarian LOZ (2007). Vacinas profiláticas para o HPV. Rev. Bras. Ginecol. Obstet. 29: 281-284. http://dx.doi.org/10.1590/S0100-72032007000600001 Giuliano A and Palefsky J (2009). Quadrivalent HPV Vaccine Efficacy Against Male Genital Disease and Infection. In: 25th International Papillomavirus Conference Clinical and Educational Workshop, Malmö. Karlsen F, Kalantari M, Jenkins A, Pettersen E, et al. (1996). Use of multiple PCR primer sets for optimal detection of human papillomavirus. J. Clin. Microbiol. 34: 2095-2100. PMid:8862564    PMCid:229196 Lorenzato F, Ho L, Terry G, Singer A, et al. (2000). The use of human papillomavirus typing in detection of cervical neoplasia in Recife (Brazil). Int. J. Gynecol. Cancer 10: 143-150. http://dx.doi.org/10.1046/j.1525-1438.2000.00007.x PMid:11240666 Muñoz N, Bosch FX, de Sanjosé S, Herrero R, et al. (2003). Epidemiologic classification of human papillomavirus types associated with cervical cancer. N. Engl. J. Med. 348: 518-527. http://dx.doi.org/10.1056/NEJMoa021641 PMid:12571259 Park RB and Androphy EJ (2002). Genetic analysis of high-risk E6 in episomal maintenance of human papillomavirus genomes in primary human keratinocytes. J. Virol. 76: 11359-11364. http://dx.doi.org/10.1128/JVI.76.22.11359-11364.2002 PMid:12388696    PMCid:136782 Rama CH, Roteli-Martins CM, Derchain SFM, Longatto-Filho A, et al. (2008a). Prevalência do HPV em mulheres rastreadas para o câncer cervical. Rev. Saúde Pública 42: 123-130. http://dx.doi.org/10.1590/S0034-89102008000100016 Rama CH, Roteli-Martins CM, Derchain SFM, Longato-Filho A, et al. (2008b). Rastreamento anterior para câncer de colo uterino em mulheres com alterações citológicas ou histológicas. Rev. Saúde Pública 42: 411-419. http://dx.doi.org/10.1590/S0034-89102008000300004 Rambout L, Hopkins L, Hutton B and Fergusson D (2007). Prophylactic vaccination against human papillomavirus infection and disease in women: a systematic review of randomized controlled trials. CMAJ 177: 469-479. http://dx.doi.org/10.1503/cmaj.070948 PMid:17671238    PMCid:1950172