Publications

Found 8 results
Filters: Author is H.A. Khan  [Clear All Filters]
2012
S. O. Bafeel, Arif, I. A., Bakir, M. A., Homaidan, A. A. Al, Farhan, A. H. Al, and Khan, H. A., DNA barcoding of arid wild plants using rbcL gene sequences, vol. 11, pp. 1934-1941, 2012.
Arif IA, Bakir MA, Khan HA, Al Farhan AH, et al. (2010). Application of RAPD for molecular characterization of plant species of medicinal value from an arid environment. Genet. Mol. Res. 9: 2191-2198. http://dx.doi.org/10.4238/vol9-4gmr848 PMid:21064026   Asahina H, Shinozaki J, Masuda K, Morimitsu Y, et al. (2010). Identification of medicinal Dendrobium species by phylogenetic analyses using matK and rbcL sequences. J. Nat. Med. 64: 133-138. http://dx.doi.org/10.1007/s11418-009-0379-8 PMid:20140532   Bafeel SO, Arif IA, Bakir MA, Khan HA, et al. (2011). Comparative evaluation of PCR success with universal primers of maturase K (matK) and ribulose-1, 5-bisphosphate carboxylase oxygenase large subunit (rbcL) for barcoding of some arid plants. Plant Omics J. 4: 195-198.   Baker HG (1989). Some Aspects of the Natural History of Seed Banks. In: Ecology of Soil Seed Banks (Leck MA, Parker VT and Simpson RL, eds.). Academic Press, San Diego, 9-21. PMCid:1350121   Bakker JP and Berendse F (1999). Constraints in the restoration of ecological diversity in grassland and heathland communities. Trends Ecol. Evol. 14: 63-68. http://dx.doi.org/10.1016/S0169-5347(98)01544-4   Batanouny KH (2001). Plants in the Deserts of the Middle East. Springer, New York.   Burgess KS, Fazekas AJ, Kesanakurti PR, Graham SW, et al. (2011). Discriminating plant species in a local temperate flora using the rbcL+matK DNA barcode. Method Ecol. Evol. 2: 333-340. http://dx.doi.org/10.1111/j.2041-210X.2011.00092.x   CBOL Plant Working Group (2009). A DNA barcode for land plants. Proc. Natl. Acad. Sci. U. S. A. 106: 12794-12797. http://dx.doi.org/10.1073/pnas.0905845106 PMid:19666622 PMCid:2722355   Chase MW, Salamin N, Wilkinson M, Dunwell JM, et al. (2005). Land plants and DNA barcodes: short-term and long-term goals. Philos. Trans. R. Soc. Lond. B Biol. Sci. 360: 1889-1895. http://dx.doi.org/10.1098/rstb.2005.1720 PMid:16214746 PMCid:1609218   de Groot GA, During HJ, Maas JW, Schneider H, et al. (2011). Use of rbcL and trnL-F as a two-locus DNA barcode for identification of NW-European ferns: an ecological perspective. PLoS One 6: e16371. http://dx.doi.org/10.1371/journal.pone.0016371 PMid:21298108 PMCid:3027654   Duffy AM, Kelchner SA and Wolf PG (2009). Conservation of selection on matK following an ancient loss of its flanking intron. Gene 438: 17-25. http://dx.doi.org/10.1016/j.gene.2009.02.006 PMid:19236909   Fazekas AJ, Burgess KS, Kesanakurti PR, Graham SW, et al. (2008). Multiple multilocus DNA barcodes from the plastid genome discriminate plant species equally well. PLoS One 3: e2802. http://dx.doi.org/10.1371/journal.pone.0002802 PMid:18665273 PMCid:2475660   Felsenstein J (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791. http://dx.doi.org/10.2307/2408678   Graham S (2002). Global estimate of endangered plant species triples. Scientific American. Available at [http://www.scientificamerican.com/article.cfm?id=global-estimate-of-endang]. Accessed January 10, 2012.   Hebert PD and Gregory TR (2005). The promise of DNA barcoding for taxonomy. Syst. Biol. 54: 852-859. http://dx.doi.org/10.1080/10635150500354886 PMid:16243770   Hegazy AK, Hammouda O, Lovettt-Doust J and Gomaa NH (2009). Variations of the germinable soil seed bank along the altitudinal gradient in the northwestern Red Sea region. Acta Ecol. Sin. 29: 20-29. http://dx.doi.org/10.1016/j.chnaes.2009.04.004   Hollingsworth ML, Andra CA, Forrest LL, Richardson J, et al. (2009). Selecting barcoding loci for plants: evaluation of seven candidate loci with species-level sampling in three divergent groups of land plants. Mol. Ecol. Resour. 9: 439-457. http://dx.doi.org/10.1111/j.1755-0998.2008.02439.x PMid:21564673   Joshi K, Chavan P, Warude D and atwardhan B (2004). Molecular markers in herbal drug technology. Curr. Sci. 87: 159-165.   Kesanakurti PR, Fazekas AJ, Burgess KS, Percy DM, et al. (2011). Spatial patterns of plant diversity below-ground as revealed by DNA barcoding. Mol. Ecol. 20: 1289-1302. http://dx.doi.org/10.1111/j.1365-294X.2010.04989.x PMid:21255172   Kress WJ, Wurdack KJ, Zimmer EA, Weigt LA, et al. (2005). Use of DNA barcodes to identify flowering plants. Proc. Natl. Acad. Sci. U. S. A. 102: 8369-8374. http://dx.doi.org/10.1073/pnas.0503123102 PMid:15928076 PMCid:1142120   Kress WJ, Erickson DL, Jones FA, Swenson NG, et al. (2009). Plant DNA barcodes and a community phylogeny of a tropical forest dynamics plot in Panama. Proc. Natl. Acad. Sci. U. S. A. 106: 18621-18626. http://dx.doi.org/10.1073/pnas.0909820106 PMid:19841276 PMCid:2763884   Li FW, Tan BC, Buchbender V, Moran RC, et al. (2009). Identifying a mysterious aquatic fern gametophyte. Plant Syst. Evol. 281: 77-86. http://dx.doi.org/10.1007/s00606-009-0188-2   Plunkett G, Soltis D and Soltis P (1997). Clarification of the relationship beteen Apiaceae and Araliaceae based on matK and rbcL sequence data. Am. J. Bot. 84: 565. http://dx.doi.org/10.2307/2446032 PMid:21708608   Ratnasingham S and Hebert PDN (2007). BOLD: The Barcode of Life Data System (www.barcodinglife.org). Mol. Ecol. Note. 7: 355-364.   Roy S, Tyagi A, Shukla V, Kumar A, et al. (2010). Universal plant DNA barcode loci may not work in complex groups: a case study with Indian berberis species. PLoS One 5: e13674. http://dx.doi.org/10.1371/journal.pone.0013674 PMid:21060687 PMCid:2965122   Soltis DE, Kuzoff RK, Conti E, Gornall R, et al. (1996). matK and rbcL gene sequence data indicate that Saxifraga (Saxifragaceae) is polyphyletic. Am. J. Bot. 83: 371-382. http://dx.doi.org/10.2307/2446171   Spooner DM (2009). DNA barcoding will frequently fail in complicated groups: An example in wild potatoes. Am. J. Bot. 96: 1177-1189. http://dx.doi.org/10.3732/ajb.0800246 PMid:21628268   Tamura K and Nei M (1993). Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol. Biol. Evol. 10: 512-526. PMid:8336541   Tamura K, Dudley J, Nei M and Kumar S (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599. http://dx.doi.org/10.1093/molbev/msm092 PMid:17488738   Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, et al. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25: 4876-4882. http://dx.doi.org/10.1093/nar/25.24.4876 PMid:9396791 PMCid:147148   Tsukaya H, Nakajima M and Okada H (2011). Kalimantanorchis: A new genus of Mycotrophic orchid from West Kalimantan, Borneo. Syst. Bot. 36: 49-52. http://dx.doi.org/10.1600/036364411X553117   Van de Wiel CC, Van Der Schoot J, Van Valkenburg JL, Duistermaat H, et al. (2009). DNA barcoding discriminates the noxious invasive plant species, floating pennywort (Hydrocotyle ranunculoides L.f.), from non-invasive relatives. Mol. Ecol. Resour. 9: 1086-1091. http://dx.doi.org/10.1111/j.1755-0998.2009.02547.x PMid:21564846   Will KW, Mishler BD and Wheeler QD (2005). The perils of DNA barcoding and the need for integrative taxonomy. Syst. Biol. 54: 844-851. http://dx.doi.org/10.1080/10635150500354878 PMid:16243769   Zhang YB, Shaw PC, Sze CW, Wang ZT, et al. (2007). Molecular authentification of Chinese herbal materials. J. Food Drug Anal. 15: 1-9.
2011
I. A. Arif, Khan, H. A., Shobrak, M., and Williams, J., Cytochrome c oxidase subunit I barcoding of the green bee-eater (Merops orientalis), vol. 10, pp. 3992-3998, 2011.
Asokan S, Thiyagesan K, Nagarajan R and Kanakasabai R (2003). Studies on Merops orientalis Latham 1801 with special reference to its population in Mayiladuthurai, Tamil Nadu. J. Environ. Biol. 24: 477-482. PMid:15248666   Bravo JP, Silva JL, Munhoz RE and Fernandez MA (2008). DNA barcode information for the sugar cane moth borer Diatraea saccharalis. Genet. Mol. Res. 7: 741-748. http://dx.doi.org/10.4238/vol7-3gmr470 PMid:18767242   Burt DB (2004). Plumage-based phylogenetic analysis of Merops bee-eaters. Ibis 146: 481-492. http://dx.doi.org/10.1111/j.1474-919x.2004.00289.x   Cai Y, Yue B, Jiang W, Xie S, et al. (2010). DNA barcoding on subsets of three families in Aves. Mitochondrial. DNA 21: 132-137.   Chaves AV, Clozato CL, Lacerda DR, Sari EH, et al. (2008). Molecular taxonomy of Brazilian tyrant-flycatchers (Passeriformes: Tyrannidae). Mol. Ecol. Res. 8: 1169-1177. http://dx.doi.org/10.1111/j.1755-0998.2008.02218.x PMid:21586004   del Hoyo J, Elliott A and Sargatal J (2001). Handbook of the Birds of the World. In: Mousebirds to Hornbills Lynx Editions, Barcelona, Dickinson EC (2003). The Howard and Moore Complete Checklist of the Birds of the World. Princeton University Press, Princeton, New Jersey.   Felsenstein J (1985). Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39: 783-791. http://dx.doi.org/10.2307/2408678   Hebert PD, Cywinska A, Ball SL and deWaard JR (2003a). Biological identifications through DNA barcodes. Proc. Biol. Sci. 270: 313-321. http://dx.doi.org/10.1098/rspb.2002.2218 PMid:12614582 PMCid:1691236   Hebert PD, Ratnasingham S and deWaard JR (2003b). Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proc. Biol. Sci. 270 (Suppl 1): S96-S99. http://dx.doi.org/10.1098/rsbl.2003.0025 PMid:12952648 PMCid:1698023   Hebert PD, Stoeckle MY, Zemlak TS and Francis CM (2004). Identification of Birds through DNA Barcodes. PLoS Biol. 2: e312. http://dx.doi.org/10.1371/journal.pbio.0020312 PMid:15455034 PMCid:518999   Kerr KC, Stoeckle MY, Dove CJ, Weigt LA, et al. (2007). Comprehensive DNA barcode coverage of North American birds. Mol. Ecol. Notes 7: 535-543. http://dx.doi.org/10.1111/j.1471-8286.2007.01670.x PMid:18784793 PMCid:2259444   Kerr KC, Birks SM, Kalyakin MV, Red'kin YA, et al. (2009). Filling the gap - COI barcode resolution in eastern Palearctic birds. Front Zool. 6: 29. http://dx.doi.org/10.1186/1742-9994-6-29 PMid:20003213 PMCid:2796652   Khan HA, Arif IA and Shobrak M (2010). DNA barcodes of Arabian partridge and philby's rock partridge: implications for phylogeny and species identification. Evol. Bioinform. Online 6: 151-158. http://dx.doi.org/10.4137/EBO.S6014 PMid:21151586 PMCid:2999960   Larkin MA, Blackshields G, Brown NP, Chenna R, et al. (2007). Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948. http://dx.doi.org/10.1093/bioinformatics/btm404 PMid:17846036   Marks BD, Weckstein JD and Moyle RG (2007). Molecular phylogenetics of the bee-eaters (Aves: Meropidae) based on nuclear and mitochondrial DNA sequence data. Mol. Phylogenet. Evol. 45: 23-32. http://dx.doi.org/10.1016/j.ympev.2007.07.004 PMid:17716922   Sneath PHA and Sokal RR (1973). Numerical Taxonomy. Freeman, San Francisco.   Tamura K, Nei M and Kumar S (2004). Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc. Natl. Acad. Sci. U. S. A. 101: 11030-11035. http://dx.doi.org/10.1073/pnas.0404206101 PMid:15258291 PMCid:491989   Tamura K, Dudley J, Nei M and Kumar S (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599. http://dx.doi.org/10.1093/molbev/msm092 PMid:17488738   Tavares ES and Baker AJ (2008). Single mitochondrial gene barcodes reliably identify sister-species in diverse clades of birds. BMC Evol. Biol. 8: 81. http://dx.doi.org/10.1186/1471-2148-8-81 PMid:18328107 PMCid:2279116   Vilaça ST, Lacerda DR, Sari HER and Santos FR (2006). DNA-based identification applied to Thamnophilidae (Passeriformes) species: the first barcodes of Neotropical birds. Rev. Bras. Ornitol. 14: 7-13.   Yoo HS, Eah JY, Kim JS, Kim YJ, et al. (2006). DNA barcoding Korean birds. Mol. Cells 22: 323-327. PMid:17202861
I. A. Arif, Khan, H. A., M. Sadoon, A., and Shobrak, M., Limited efficiency of universal mini-barcode primers for DNA amplification from desert reptiles, birds and mammals, vol. 10, pp. 3559-3564, 2011.
Clare EL, Lim BK, Engstrom MD, Eger JL, et al. (2007). DNA barcoding of Neotropical bats: species identification and discovery within Guyana. Mol. Ecol. Notes. 7: 184-190. http://dx.doi.org/10.1111/j.1471-8286.2006.01657.x   Dawnay N, Ogden R, McEwing R, Carvalho GR, et al. (2007). Validation of the barcoding gene COI for use in forensic genetic species identification. Forensic Sci. Int. 173: 1-6. http://dx.doi.org/10.1016/j.forsciint.2006.09.013 PMid:17300895   Dubey B, Meganathan PR and Haque I (2011). DNA mini-barcoding: an approach for forensic identification of some endangered Indian snake species. Forensic Sci. Int. Genet. 5: 181-184. http://dx.doi.org/10.1016/j.fsigen.2010.03.001 PMid:20457097   Elias M, Hill RI, Willmott KR, Dasmahapatra KK, et al. (2007). Limited performance of DNA barcoding in a diverse community of tropical butterflies. Proc. Biol. Sci. 274: 2881-2889. http://dx.doi.org/10.1098/rspb.2007.1035 PMid:17785265 PMCid:3227132   Hebert PDN, Cywinska A, Ball SL and deWaard JR (2003a). Biological identifications through DNA barcodes. Proc. R. Soc. Lond. B 270: 313-321. http://dx.doi.org/10.1098/rspb.2002.2218 PMid:12614582 PMCid:1691236   Hebert PD, Ratnasingham S and deWaard JR (2003b). Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proc. Biol. Sci. (Suppl 1) 270: S96-S99. http://dx.doi.org/10.1098/rsbl.2003.0025 PMid:12952648 PMCid:1698023   Ivanova NV, Zemlak TS, Hanner RH and Hebert PDN (2007). Universal primer cocktails for fish DNA barcoding. Mol. Ecol. Notes 7: 544-548. http://dx.doi.org/10.1111/j.1471-8286.2007.01748.x   Khan HA, Arif IA and Shobrak M (2010). DNA barcodes of Arabian partridge and philby's rock partridge: implications for phylogeny and species identification. Evol. Bioinform. Online 6: 151-158. http://dx.doi.org/10.4137/EBO.S6014 PMid:21151586 PMCid:2999960   Lorenz JG, Jackson WE, Beck JC and Hanner R (2005). The problems and promise of DNA barcodes for species diagnosis of primate biomaterials. Philos. Trans. R. Soc. Lond. B. Biol. Sci. 360: 1869-1877. http://dx.doi.org/10.1098/rstb.2005.1718 PMid:16214744 PMCid:1609219   Meusnier I, Singer GA, Landry JF, Hickey DA, et al. (2008). A universal DNA mini-barcode for biodiversity analysis. BMC Genomics 9: 214. http://dx.doi.org/10.1186/1471-2164-9-214 PMid:18474098 PMCid:2396642   Rubinoff D, Cameron S and Will K (2006). A genomic perspective on the shortcomings of mitochondrial DNA for "barcoding" identification. J. Hered. 97: 581-594. http://dx.doi.org/10.1093/jhered/esl036 PMid:17135463   Song H, Buhay JE, Whiting MF and Crandall KA (2008). Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified. Proc. Natl. Acad. Sci. U. S. A. 105: 13486- 13491. http://dx.doi.org/10.1073/pnas.0803076105 PMid:18757756 PMCid:2527351   Sorenson MD, Ast JC, Dimcheff DE, Yuri T, et al. (1999). Primers for a PCR-based approach to mitochondrial genome sequencing in birds and other vertebrates. Mol. Phylogenet. Evol. 12: 105-114. http://dx.doi.org/10.1006/mpev.1998.0602 PMid:10381314   Valentini A, Pompanon F and Taberlet P (2009). DNA barcoding for ecologists. Trends Ecol. Evol. 24: 110-117. http://dx.doi.org/10.1016/j.tree.2008.09.011 PMid:19100655   Ward RD, Zemlak TS, Innes BH, Last PR, et al. (2005). DNA barcoding Australia's fish species. Philos. Trans. R. Soc. Lond. B. Biol. Sci. 360: 1847-1857. http://dx.doi.org/10.1098/rstb.2005.1716 PMid:16214743 PMCid:1609232   Zhang DX and Hewitt GM (1996). Highly conserved nuclear copies of the mitochondrial control region in the desert locust Schistocerca gregaria: some implications for population studies. Mol. Ecol. 5: 295-300. PMid:8673275
2010
I. A. Arif, Bakir, M. A., Khan, H. A., Farhan, A. H. Al, Homaidan, A. A. Al, Bahkali, A. H., M. Sadoon, A., and Shobrak, M., Application of RAPD for molecular characterization of plant species of medicinal value from an arid environment, vol. 9, pp. 2191-2198, 2010.
Aras S, Duran A and Yenilmez G (1993). Isolation of DNA for RAPD analysis from dry leaf material of some Hesperis L. specimens. Plant Mol. Biol. Rep. 21: 461a-461f. http://dx.doi.org/10.1007/BF02772597   Arif IA and Khan HA (2009). Molecular markers for biodiversity analysis of wildlife animals: a brief review. Anim. Biodiv. Conserv. 32: 9-16.   Bartish IV, Garkava LP, Rumpunen K and Nybom H (2000). Phylogenetic relationship and differentiation among and within population of Chaenomeles Lindl. (Rosaceae) estimated with RAPDs and isozyme. Theor. Appl. Genet. 101: 554-563. http://dx.doi.org/10.1007/s001220051515   Batanouny KH (2001). Plants in the Deserts of the Middle East. Springer, New York.   Choo BK, Moon BC, Ji Y, Kim BB, et al. (2009). Development of SCAR markers for the discrimination of three species of medicinal plants, Angelica decursiva (Peucedanum decursivum), Peucedanum praeruptorum and Anthricus sylvestris, based on the internal transcribed spacer (ITS) sequence and random amplified polymorphic DNA (RAPD). Biol. Pharm. Bull. 32: 24-30. http://dx.doi.org/10.1248/bpb.32.24 PMid:19122275   Collard BCY and Mackill DJ (2009). Start codon targeted (SCoT) polymorphism: a simple, novel DNA marker technique for generating gene targeted markers in plants. Plant Mol. Biol. Rep. 27: 86-93. http://dx.doi.org/10.1007/s11105-008-0060-5   De Benedetti L, Mercuri A, Bruna S, Burchi G, et al. (2001). Genotype identification of ornamental species by RAPD analysis. Acta Hort. 546: 391-394.   Devi PU, Akagi K, Ostapenko V, Tanaka Y, et al. (1996). Withaferin A: a new radiosensitizer from the Indian medicinal plant Withania somnifera. Int. J. Radiat. Biol. 69: 193-197. http://dx.doi.org/10.1080/095530096146020 PMid:8609455   Echeverrigaray S, Agostini G, Atti-Serfini L, Paroul N, et al. (2001). Correlation between the chemical and genetic relationships among commercial thyme cultivars. J. Agric. Food Chem. 49: 4220-4223. http://dx.doi.org/10.1021/jf010289j PMid:11559114   Ghazanfar SA (1994). Handbook of Arabian Medicinal Plants. CRC Press, Florida.   Grace NN, Rainer BW, Barbara G, Eric NL, et al. (2004). Utilization of weed species as sources of traditional medicines in central Kenya. Lyonia 7: 71-87.   Hegazy AK, Hammouda O, Lovett-Doust J and Gomaa NH (2009). Variations of the germinable soil seed bank along the altitudinal gradient in the northwestern Red Sea region. Acta Ecol. Sin. 2: 20-29. http://dx.doi.org/10.1016/j.chnaes.2009.04.004   Heneidy SZ and Bidak LM (2004). Potential uses of plant species of the coastal Mediterranean region, Egypt. Pak. J. Biol. Sci. 7: 1010-1023. http://dx.doi.org/10.3923/pjbs.2004.1010.1023   Jones CJ, Edwards KJ, Castaglione S, Winfield MO, et al. (1997). Reproducibility testing of RAPD, AFLP and SSR markers in plants by a network of European laboratories. Mol. Breed. 3: 381-390. http://dx.doi.org/10.1023/A:1009612517139   Joshi K, Chavan P, Warude D and Patwardhan B (2004). Molecular markers in herbal drug technology. Curr. Sci. 87: 159-165.   Liu P, Yang YS, Hao CY and Guo WD (2007). Ecological risk assessment using RAPD and distribution pattern of a rare and endangered species. Chemosphere 68: 1497-1505. http://dx.doi.org/10.1016/j.chemosphere.2007.03.018 PMid:17498776   Lu HP, Cai YW, Chen XY, Zhang X, et al. (2006). High RAPD but no cpDNA sequence variation in the endemic and endangered plant, Heptacodium miconioides Rehd. (Caprifoliaceae). Genetica 128: 409-417. http://dx.doi.org/10.1007/s10709-006-7542-x PMid:17028968   Micheli MR, Bova R, Pascale E and D'Ambrosio E (1994). Reproducible DNA fingerprinting with the random amplified polymorphic DNA (RAPD) method. Nucleic Acids Res. 22: 1921-1922. http://dx.doi.org/10.1093/nar/22.10.1921 PMid:8208620 PMCid:308096   Middleditch BS and Amer AM (1991). Kuwaiti Plants. In: Studies in Plant Science Elsevier Science, Amsterdam,   Mishra LC, Singh BB and Dagenais S (2000). Scientific basis for the therapeutic use of Withania somnifera (Ashwagandha): a review. Altern. Med. Rev. 5: 335-346.   Mossa JS, Al-Yahya MA and Al-Meshal IA (1987). Medicinal Plants of Saudi Arabia. King Saud University Press, Riyadh.   Penner GA, Bush A, Wise R, Kim W, et al. (1993). Reproducibility of random amplified polymorphic DNA (RAPD) analysis among laboratories. Genome Res. 2: 341-345. http://dx.doi.org/10.1101/gr.2.4.341   Ranade SA, Farooqui N, Bhattacharya E and Verma A (2001). Gene tagging with random amplified polymorphic DNA (RAPD) marker for molecular breeding in plants. Crit. Rev. Plant Sci. 20: 251-275.   Sathiyamoorthy P, Lugasi-Evgi H, Schlesinger P, Kedar I, et al. (1999). Screening for cytotoxic and antimalarial activities in desert plants of the Negev and Bedouin market plant products. Pharm. Biol. 37: 188-195. http://dx.doi.org/10.1076/phbi.37.3.188.6298   Shinde VM, Dhalwal K, Mahadik KR, Joshi KS, et al. (2007). RAPD analysis for determination of components in herbal medicine. Evid. Based Complement Alternat. Med. 4: 21-23. http://dx.doi.org/10.1093/ecam/nem109 PMid:18227927 PMCid:2206231   Skroch P and Nienhuis J (1995). Impact of scoring error and reproducibility of RAPD data on RAPD based estimates of genetic distance. Theor. Appl. Genet. 91: 1086-1091.   Temiesak P, Ponpim Y and Harada T (1993). RAPD analysis for varietal identification in Brassica. Kasetsart J. Nat. Sci. 27: 37-42.   Tochika-Komatsu Y, Asaka I and Ii I (2001). A random amplified polymorphic DNA (RAPD) primer to assist the identification of a selected strain, aizu K-111 of Panax ginseng and the sequence amplified. Biol. Pharm. Bull. 24: 1210-1213. http://dx.doi.org/10.1248/bpb.24.1210 PMid:11642336   Um JY, Chung HS, Kim MS, Na HJ, et al. (2001). Molecular authentication of Panax ginseng species by RAPD analysis and PCR-RFLP. Biol. Pharm. Bull. 24: 872-875. http://dx.doi.org/10.1248/bpb.24.872 PMid:11510476   Vanijajiva O, Sirirugsa P and Suvachittanont W (2005). Confirmation of relationships among Boesenbergia (Zingiberaceae) and related genera by RAPD. Biochem. Syst. Ecol. 33: 159-170. http://dx.doi.org/10.1016/j.bse.2004.06.012   Wang Y, Wang S, Zhao Y, Khan DM, et al. (2009). Genetic characterization of a new growth habit mutant in tomato (Solanum lycopersicum). Plant Mol. Biol. Rep. 27: 431-438. DOI:10.1007/s11105-009-0095-2. http://dx.doi.org/10.1007/s11105-009-0095-2   Wang ZS, An SQ, Liu H, Leng X, et al. (2005). Genetic structure of the endangered plant Neolitsea sericea (Lauraceae) from the Zhoushan archipelago using RAPD markers. Ann. Bot. 95: 305-313. http://dx.doi.org/10.1093/aob/mci027 PMid:15546928   Weder JKP (2002). Influence of experimental conditions on the reproducibility of RAPD-PCR identification of legumes and cereals. Lebensm. Wiss. Technol. 35: 233-238. http://dx.doi.org/10.1006/fstl.2001.0844   Welsh J and McClelland M (1990). Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Res. 18: 7213-7218. http://dx.doi.org/10.1093/nar/18.24.7213 PMid:2259619 PMCid:332855   Williams JG, Kubelik AR, Livak KJ, Rafalski JA, et al. (1990). DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 18: 6531-6535. http://dx.doi.org/10.1093/nar/18.22.6531 PMid:1979162 PMCid:332606   Zhang YB, Shaw PC, Sze CW, Wang ZT, et al. (2007). Molecular authentication of Chinese herbal materials. J. Food Drug Anal. 15: 1-9.   Zheng W, Wang L, Meng L and Liu J (2008). Genetic variation in the endangered Anisodus tanguticus (Solanaceae), an alpine perennial endemic to the Qinghai-Tibetan Plateau. Genetica 132: 123-129. http://dx.doi.org/10.1007/s10709-007-9154-5 PMid:17516136
I. A. Arif, Khan, H. A., Shobrak, M., Homaidan, A. A. Al, M. Sadoon, A., Farhan, A. H. Al, and Bahkali, A. H., Interpretation of electrophoretograms of seven microsatellite loci to determine the genetic diversity of the Arabian Oryx, vol. 9, pp. 259-265, 2010.
Banhos A, Hrbeck T, Gravena W, Sanaiotti T, et al. (2008). Genomic resources for the conservation and management of the harpy eagle (Harpia harpyja, Falconiformes, Accipitridae). Genet. Mol. Biol. 31: 146-154. http://dx.doi.org/10.1590/S1415-47572008000100025   Bonin A, Bellemain E, Bronken EP, Pompanon F, et al. (2004). How to track and assess genotyping errors in population genetics studies. Mol. Ecol. 13: 3261-3273. http://dx.doi.org/10.1111/j.1365-294X.2004.02346.x PMid:15487987   Chan CH, Zhao Y, Cheung MY and Chambers GK (2008). Isolation and characterization of microsatellites in the kakerori (Pomarea dimidiata) using feathers as source of DNA. Conserv. Genet. 9: 1067-1070. http://dx.doi.org/10.1007/s10592-007-9456-2   Harker N (2001). Collection, Reporting and Storage of Microsatellite Genotype Data. In: Plant Genotyping: the DNA Fingerprinting of Plants (Henry RJ, ed.). CAB International, Wallingford, UK & New York, USA, 251-264. http://dx.doi.org/10.1079/9780851995151.0251   Hoffman JI and Amos W (2005). Microsatellite genotyping errors: detection approaches, common sources and consequences for paternal exclusion. Mol. Ecol. 14: 599-612. http://dx.doi.org/10.1111/j.1365-294X.2004.02419.x PMid:15660949   Johansson A, Karlsson P and Gyllensten U (2003). A novel method for automatic genotyping of microsatellite markers based on parametric pattern recognition. Hum. Genet. 113: 316-324. http://dx.doi.org/10.1007/s00439-003-0973-x PMid:12883999   Kawka M, Horbanczuk JO, Sacharczuk M, Zieba G, et al. (2007). Genetic characteristics of the Ostrich population using molecular methods. Poult. Sci. 86: 277-281. PMid:17234840   Li Y, Wongprasert K, Shekhar M, Ryan J, et al. (2007). Development of two microsatellite multiplex systems for black tiger shrimp Penaeus monodon and its application in genetic diversity study for two populations. Aquaculture 266: 279-288. http://dx.doi.org/10.1016/j.aquaculture.2007.01.038   MacHugh DE, Shriver MD, Loftus RT, Cunningham P, et al. (1997). Microsatellite DNA variation and the evolution, domestication and phylogeography of taurine and zebu cattle (Bos taurus and Bos indicus). Genetics 146: 1071-1086. PMid:9215909 PMCid:1208036   Ryberg WA, Fitzgerald LA, Honeycutt RL and Cathey JC (2002). Genetic relationships of American alligator populations distributed across different ecological and geographic scales. J. Exp. Zool. 294: 325-333. http://dx.doi.org/10.1002/jez.10207 PMid:12461812   Selkoe KA and Toonen RJ (2006). Microsatellites for ecologists: a practical guide to using and evaluating microsatellite markers. Ecol. Lett. 9: 615-629. http://dx.doi.org/10.1111/j.1461-0248.2006.00889.x PMid:16643306   Zhou H, Li D, Zhang Y, Yang T, et al. (2007). Genetic diversity of microsatellite DNA loci of Tibetan antelope (Chiru, Pantholops hodgsonii) in Hoh Xil National Nature Reserve, Qinghai, China. J. Genet. Genomics 34: 600-607. http://dx.doi.org/10.1016/S1673-8527(07)60068-X