Publications

Billotte N, Lagoda PJR, Risterucci AM and Baurens FC (1999). Microsatellite-enriched libraries: applied methodology for the development of SSR markers in tropical crops. Fruits 54: 277-288.   Doyle JJ and Doyle JL (1987). A rapid DNA isolation for small quantities 161 of leaf tissue. Phytochem. Bull. 19: 11-15.   Excoffier L, Laval G and Schneider S (2005). Arlequin (version 3.0): An integrated software package for population genetics data analysis. Evol. Bioinform. Online 1: 47-50. PMCid:2658868   Litt M and Luty JA (1989). A hypervariable microsatellite revealed by in vitro amplification of a dinucleotide repeat within the cardiac muscle actin gene. Am. J. Hum. Genet. 44: 397-401. PMid:2563634 PMCid:1715430   Lorenzi H (2002). Árvores Brasileiras: Manual de Identificação e Cultivo de Plantas Arbóreas Nativas do Brasil. 2ª ed. Plantarum, Nova Odessa.   Marshall TC, Slate J, Kruuk L and Pemberton JM (1998). Statistical confidence for likelihood-based paternity inference in natural populations. Mol. Ecol. 7: 639-655. http://dx.doi.org/10.1046/j.1365-294x.1998.00374.x PMid:9633105   Reitz PR (1968). Sapotaceas. Itajaí: Herbário Barbosa Rodrigues, Flora Ilustrada Catarinense. Parte I: As Plantas. 72.   Rozen S and Skaletsky HJ (2000). PRIMER 3 on the WWW for General Users and for Biologist Programmers. In: Bioinformatics Methods and Protocols: Methods in Molecular Biology (Krawetz S and Misener S, eds.). Humana Press, Totowa, New Jersey.

Billotte N, Lagoda PJR, Risterucci AM and Baurens FC (1999). Microsatellite-enriched libraries: applied methodology for the development of SSR markers in tropical crops. Fruits 54: 277-288.   Doyle JJ and Doyle JL (1987). A rapid DNA isolation for small quantities 161 of leaf tissue. Phytochem. Bull. 19: 11-15.   Durigan G and Nogueira JCB (1990). Recomposição de Matas Ciliares. Instituto Florestal, São Paulo.   Edwards KJ, Barker JH, Daly A, Jones C, et al. (1996). Microsatellite libraries enriched for several microsatellite sequences in plants. Biotechniques 20: 758-760. PMid:8723911   Franco IJ and Fontana VL (1997). Ervas & Plantas: A Medicina dos Simples. Imprimax, Erechim.   Kageyama PY (1992). Recomposição da Vegetação com Espécies Arbóreas Nativas em Reservatórios de Usinas Hidrelétricas da CESP. Série Técnica IPEF, São Paulo.   Lorenzi H (2002). Árvores Brasileiras: Manual de Identificação e Cultivo de Plantas Arbóreas Nativas do Brasil. 2ª ed. Plantarum, Nova Odessa.   Marshall TC, Slate J, Kruuk LE and Pemberton JM (1998). Statistical confidence for likelihood-based paternity inference in natural populations. Mol. Ecol. 7: 639-655. http://dx.doi.org/10.1046/j.1365-294x.1998.00374.x PMid:9633105   Peters MB, Hagen C, Trapnell DW, Hamrick JL, et al. (2008). Isolation and characterization of microsatellite loci in the Guanacaste tree, Enterolobium cyclocarpum. Mol. Ecol. Resour. 8: 129-131. http://dx.doi.org/10.1111/j.1471-8286.2007.01896.x PMid:21585735   Raymond M and Rousset F (1995). Genepop (version 1.2): population genetics software for exact tests and ecumenicism. J. Hered. 86: 248-249.   Ribas LA (1999). Variabilidade Isoenzimática e Sistema de Cruzamento de Parapiptadenia rigida em um Pomar de Sementes. Doctoral thesis, Universidade Federal de Viçosa, Viçosa.   Rozen S and Skaletsky HJ (2000). PRIMER 3 on the WWW for General Users and for Biologist Programmers. In: Bioinformatics Methods and Protocols: Methods in Molecular Biology (Krawetz S and Misener S, eds.). Humana Press, Totowa.   Vaccaro S, Longhi SJ and Brena DA (1999). Aspectos da composição florística e categorias sucessionais do estrato arbóreo de três subseres de uma floresta estacional decidual, no município de Santa Tereza (RS). Rev. Ciênc. Florestal 9: 1-18.   Ware D, Jaiswal P, Ni J, Pan X, et al. (2002). Gramene: a resource for comparative grass genomics. Nucleic Acids Res. 30: 103-105. http://dx.doi.org/10.1093/nar/30.1.103 PMid:11752266 PMCid:99157

Armstrong W (1980). Aeration in higher plants. Adv. Bot. Res. 7: 225-332. http://dx.doi.org/10.1016/S0065-2296(08)60089-0   Armstrong W, Brändle R and Jackson MB (1994). Mechanisms of flood tolerance in plants. Acta. Bot. Neer. 43: 307-358.   Batista CUN, Medri ME, Bianchini E, Medri C, et al. (2008). Flood tolerance in Cecropia pachystachya Trec. (Cecropiaceae): ecophysiological and morpho-anatomical aspects. Acta Bot. Bras. 22: 91-98. http://dx.doi.org/10.1590/S0102-33062008000100012   Bianchini E, Medri ME, Pimenta JA, Giloni PC, et al. (2000). Anatomical alterations in plants of Chorisia speciosa A. St.- Hill. submitted to flooding. Interciencia 25: 436-411.   Blom CWPM, Voesenek LACJ, Banga M, Engelaar WMHG, et al. (1994). Physiological ecology of riverside species: adaptive responses of plants to submergence. Ann. Bot. 74: 253-263. http://dx.doi.org/10.1006/anbo.1994.1116   Bradford KJ and Yang SF (1980). Stress-induced ethylene production in the ethylene-requiring tomato mutant diageotropica. Plant Physiol. 65: 327-330. http://dx.doi.org/10.1104/pp.65.2.327 PMid:16661183 PMCid:440320   Carvalho MCCG, Da Silva DCG, Ruas PM, Medri ME, et al. (2008). Flooding tolerance and genetic diversity in populations of Luehea divaricata. Biol. Plantarum 54: 771-774. http://dx.doi.org/10.1007/s10535-008-0150-0   Chen H, Qualls RG and Miller GC (2002). Adaptive responses of Lepidium latifolium to soil flooding: biomass allocation, adventitious rooting, aerenchyma formation and ethylene production. Environ. Exp. Bot. 48: 119-128. http://dx.doi.org/10.1016/S0098-8472(02)00018-7   Coelho ASG (2000). Dboot: Avaliação dos Erros Associados a Estimativas de Distâncias/Similaridades Genéticas Através do Procedimento de Bootstrap com Número Variável de Marcadores (Software). Universidade Federal de Goiás, Instituto de Ciências Biológicas, Laboratório de Genética Vegetal, Goiânia.   Crawford RMM (1992). Oxygen availability as an ecological limit to plant distribution. Adv. Ecol. Res. 23: 93-185. http://dx.doi.org/10.1016/S0065-2504(08)60147-6   Crawford RMM and Braendle R (1996). Oxygen deprivation stress in a changing environment. J. Exp. Bot. 47: 145-159. http://dx.doi.org/10.1093/jxb/47.2.145   Davanso-Fabro VM, Medri ME, Bianchini E and Pimenta JA (1998). Tolerância à inundação: aspectos da anatomia ecológica e do desenvolvimento de Sesbania virgata (Cav.) Pers. (Fabaceae). Braz. Arch. Biol. Technol. 41: 475-482. http://dx.doi.org/10.1590/S1516-89131998000400012   Doyle JJ and Doyle JL (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytoch. Bull. 19: 11-15.   Ferreira ME and Grattapaglia D (1996). Introdução ao Uso de Marcadores Moleculares em Análise Genética. 2nd edn. Embrapa-Cenargen, Brasília.   Gillies AC, Navarro C, Lowe AJ, Newton AC, et al. (1999). Genetic diversity in Mesoamerican populations of mahogany (Swietenia macrophylla), assessed using RAPDs. Heredity 83 (Pt 6): 722-732. http://dx.doi.org/10.1046/j.1365-2540.1999.00626.x PMid:10651917   Guerra MJM, Barreiro ML, Rodriguez ZM and Rubalcada Y (2000). Actividad antimicrobiana de un extracto fluido al 80% de Schinus terebinthifolius Raddi (COPAL). Rev. Cubana Plant Med. 5: 23-25.   Hartl DL and Clark AG (1988). Principles of Population Genetics. Sinauer Associates, Sunderland.   Hook DD and Scholtens JR (1978). Adaptations and Flood Tolerance of Tree Species. In: Plant Life in Anaerobic Environments (Hook DD and Crawford RMM, eds.). Ann Arbor Science Publishers, Michigan, 299-331.   Jordano P and Godoy JA (2000). RAPD variation and population genetic structure in Prunus mahaleb (Rosaceae), an animal-dispersed tree. Mol. Ecol. 9: 1293-1305. http://dx.doi.org/10.1046/j.1365-294x.2000.01009.x PMid:10972769   Justin SHFW and Armstrong W (1991). Evidence for the involvement of ethylene in aerenchyma formation in adventitious roots of rice (Oryza sativa L.). New Phytol. 118: 49-62. http://dx.doi.org/10.1111/j.1469-8137.1991.tb00564.x   Lenzi M and Orth AI (2004). Characterization of the functional reproductive system of the pink-pepper (Schinus terebinthifolius Raddi), in Florianópolis, SC, Brazil. Rev. Bras. Frutic. 26: 198-201. http://dx.doi.org/10.1590/S0100-29452004000200004   Lobo PC and Joly CA (1998). Tolerance to hypoxia and anoxia in Neotropical tree species. Oecol. Bras. 4: 137-156. http://dx.doi.org/10.4257/oeco.1998.0401.07   Lorenzi H (2002). Árvores brasileiras: manual de identificação e cultivo de plantas arbóreas nativas do Brasil. 2nd edn. Instituto Plantarum, Nova Odessa.   Luque R, Sousa HC and Kraus JE (1996). Métodos de coloração de Roeser (1972) - modificado - e Kropp (1972) visando a substituição do azul de astra por azul de alcião 8GS ou 8GX. Acta Bot. Bras. 10: 199-212.   Medri ME, Bianchini E, Pimenta JA, Colli S, et al. (2002). Estudos sobre a Tolerância ao Alagamento em Espécies Arbóreas Nativas da Bacia do Rio Tibagi. In: A Bacia do Rio Tibagi (Medri ME, Bianchini E, Shibatta OA and Pimenta JA, eds.). Edição dos Editores, Londrina, 133-172.   Medri ME, Ferreira AC, Kolb RM, Bianchini E, et al. (2007). Morpho-anatomical alterations in plants of Lithraea molleoides (Vell.) Engl. submitted to flooding. Acta Sci. Biol. Sci. 29: 15-22.   Melo J, Amorim E and Albuquerque U (2009). Native medicinal plants commercialized in Brazil - priorities for conservation. Environ. Monit. Assess. 156: 567-580. http://dx.doi.org/10.1007/s10661-008-0506-0 PMid:18726244   Mielke MS, Almeida AAF, Gomes FP, Mangabeira PAO, et al. (2005). Effects of soil flooding on leaf gas exchange and growth of two Neotropical pioneer tree species. New Forests 29: 161-168. http://dx.doi.org/10.1007/s11056-005-0247-7   Moog PR (1998). Flooding tolerance of Carex species. I. Root structure. Planta 207: 189-198. http://dx.doi.org/10.1007/s004250050472   Moog PR and Janiesch P (1990). Root-growth and morphology of Carex species as influenced by oxygen deficiency. Funct. Ecol. 4: 201-208. http://dx.doi.org/10.2307/2389339   Nei M (1978). Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590. PMid:17248844 PMCid:1213855   Reid DM and Bradford KJ (1984). Effects of Flooding on Hormone Relations. In: Flooding and Plant Growth (Kozlowski TT, ed.). Academic Press, London, 195-219.   Schneider S, Roessll D and Excoffier L (2000). ARLEQUIN: A Software for Population Genetics Data Analysis, Version 2.0. Genetics and Biometry Laboratory, Department of Anthropology, University of Geneva, Geneva.   Statistical Analysis Systems (SAS) (1990). SAS Procedures Guide. SAS Institute Inc., Cary.   Tsukahara H and Kozlowski T (1985). Importance of adventitious roots to growth of flooded Platanus occidentalis seedlings. Plant Soil 88: 123-132. http://dx.doi.org/10.1007/BF02140671   Visser EJW, Voesenek LACJ, Vartapetian BB and Jackson MB (2003). Flooding and plant growth. Ann. Bot. 91: 107-109. http://dx.doi.org/10.1093/aob/mcg014   Voeseneck LACJ and Van der Veen R (1994). The role of phytohormones in plant stress: too much or too little water. Acta Bot. Neerl. 43: 91-127.   Wright S (1951). The genetical structure of populations. Ann. Eugenics 15: 323-354.   Yeh FC, Yang R, Boyle TJ, Ye Z, et al. (2000). PopGene32, Microsoft Windows-based Freeware for Population Genetic Analysis, Version 1.32. Molecular Biology and Biotechnology Centre, University of Alberta, Edmonton.

Aide TM and Rivera E (1998). Geographic patterns of genetic diversity in Poulsenia armata (Moraceae): implications for the theory of Pleistocene refugia and the importance of riparian forest. J. Biogeogr. 25: 695-705. doi:10.1046/j.1365-2699.1998.2540695.x Aizen MA and Feinsinger P (1994). Forest fragmentation, pollination, and plant reproduction in a chaco dry forest, Argentina. Ecology 75: 330-351. doi:10.2307/1939538 Alexander JA, Liston A and Popovich SJ (2004). Genetic diversity of the narrow endemic Astragalus oniciformis (Fabaceae). Am. J. Bot. 91: 2004-2012. doi:10.3732/ajb.91.12.2004 PMid:21652349 Campos JC and Landgraf PRC (2001). Análise da regeneração natural de espécies florestais em matas ciliares de acordo com a distância da margem do lago. Ciênc. Flor. 11: 143-151. Carvalho DA, Oliveira-Filho AT, Van der Berg E, Fontes MAL, et al. (2005). Structural and floristic variations of the arboreal component of a tropical upper montane rainforest on the margin of the Rio Grande, Bocaina de Minas, Brazil. Acta Bot. Bras. 19: 91-109. doi:10.1590/S0102-33062005000100010 Carvalho PER (1994). Espécies Florestais Brasileiras: Recomendações Silviculturais, Potencialidades e Uso da Madeira. Empresa Brasileira de Pesquisa Agropecuária. EMBRAPA-CNPF/SPI, Paraná, 533-608. Coelho ASG (2001). Software: dBOOD - Avaliação de Dendrogramas Baseados em Estimativas de Distâncias/ Similaridades Genéticas Através do Procedimento de Bootstrap, V. 3.0. Departamento de Biologia Geral, Instituto de Ciências Biológicas, Universidade Federal de Goiás, Goiânia. Costa JA (2009). Estudo Populacional de Aspidosperma polyneuron Mull. Arg. (Pocynaceae) em Fragmento de Floresta Estacional Semidecidual no Sul do Brasil. Master Science Dissertation, Universidade Estadual de Londrina, Londrina. De Carvalho MCCG, Da Silva DCG, Ruas PM, Medri ME, et al. (2008). Flooding tolerance and genetic diversity in populations of Luehea divaricata. Biol. Plant. 52: 771-774. doi:10.1007/s10535-008-0150-0 Doyle JJ and Doyle JL (1987). A rapid DNA isolation for small quantities of leaf tissue. Phytochem. Bull. 19: 11-15. Excoffier L, Laval G and Schneider S (2005). Arlequin (version 3.0): an integrated software package for population genetics data analysis. Evol. Bioinform. Online 1: 47-50. PMid:19325852 Frankham R (1995). Effective population size/adult population size ratios in wildlife: a review. Genet. Res. 66: 95-107. doi:10.1017/S0016672300034455 Gillies ACM, Cornelius JP, Newton AC, Navarro C, et al. (1997). Genetic variation in Costa Rica populations of the tropical timer species Cedrela odorata L., assessed using RAPDs. Mol. Ecol. 6: 1133-1145. doi:10.1046/j.1365-294X.1997.00287.x Gillies ACM, Navarro C, Lowe AJ, Newton AC, et al. (1999). Genetic diversity in mesoamerican populations of mahogany (Swietenia macrophylla), assessed using RAPDs. Heredity 83: 722-732. doi:10.1046/j.1365-2540.1999.00626.x PMid:10651917 Hamrick JL and Loveless MD (1989). The Genetic Structure of Tropical Tree Populations: Associations With Reproductive Biology. In: Evolutionary Ecology of Plants (Bock JK and Linhart YB, eds.). Westview Press, Boulder, 129-146. Hatschbach GG and Ziller SR (1995). Lista Vermelha de Plantas Ameaçadas de Extinção no Estado de Paraná. Empresa Brasileira de Pesquisa Agropecuária. SEMA/GTZ, Curitiba, 139. PMid:10972764 Krauss SL (2000). Accurate gene diversity estimates from amplified fragment length polymorphism (AFLP) markers. Mol. Ecol. 9: 1241-1245. doi:10.1046/j.1365-294x.2000.01001.x Kremen C and Ricketts T (2000). Global perspectives on pollination disruptions. Conservat. Biol. 14: 1226-1228. doi:10.1046/j.1523-1739.2000.00013.x Lamont WJ, Hensley DL, Wiest S and Gaussoin RE (1993). Relay-intercropping muskmelons with scotch pine christmas trees using plastic mulch and drip irrigation. HortScience 28: 177-178. Leonardi S and Menozzi P (1996). Spatial structure of genetic variability in natural stands of Fagus sylvatica L. (beech) in Italy. Heredity 77: 359-368. doi:10.1038/hdy.1996.154 PMid:12582711 Lorenzi H (2002). Árvores Brasileiras: Manual de Identificação e Cultivo de Plantas Arbóreas Nativas do Brasil. Editora Plantarum, Nova Odessa, 384. Maguire TL, Peakall R and Saenger P (2002). Comparative analysis of genetic diversity in the mangrove species Avicennia marina (Forsk.) Vierh. (Avicenniaceae) detected by AFLPs and SSRs. Theor. Appl. Genet. 104: 388-398. doi:10.1007/s001220100724 PMid:12074722 Marcondes-Ferreira Neto W (1988). Aspidosperma Mart., nom. cons. (Apocynaceae): Estudos Taxonômicos. PhD Thesis, Universidade Estadual de Campinas, Campinas, 98. Mariette S, Le Corre V, Austerlitz F and Kremer A (2002). Sampling within the genome for measuring within-population diversity: trade-offs between markers. Mol. Ecol. 11: 1145-1156. doi:10.1046/j.1365-294X.2002.01519.x Merzeau D, Comps B, ThieBaut B, Cuguen J, et al. (1994). Genetic structure of natural stands of Fagus sylvatica L. (Beech). Heredity 72: 269-277. doi:10.1038/hdy.1994.37 Morelatto PC and Leitão-Filho HF (1995). Ecologia e Preservação de uma Floresta Tropical Urbana: Reserva de Santa Genebra. UNICAMP/FAPESP, Campinas. Nei M (1972). Genetic distance between populations. Am. Nat. 106: 283-292. doi:10.1086/282771 PMid:17248844    PMCid:1213855 Nei M (1978). Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590. Newman D and Pilson D (1997). Increased probability of extinction due to decreased genetic effective population size: experimental populations of Clarkia pulchella. Evolution 51: 354-362. doi:10.2307/2411107 PMid:12939633 Pither R, Shore JS and Kellman M (2003). Genetic diversity of the tropical tree Terminalia amazonia (Combretaceae) in naturally fragmented populations. Heredity 91: 307-313. doi:10.1038/sj.hdy.6800299 PMid:10835412    PMCid:1461096 Pritchard JK, Stephans M and Donnelly P (2000). Inference of population structure using multilocus genotype data. Genetics 155: 945-959. Ribas LLF, Zanette F, Kulchetscki L and Guerra MP (2005). Micropropagação de Aspidosperma polyneuron (peroba-rosa) a partir de segmentos nodais de mudas juvenis. Árvore 29: 517-524. Rodrigues LA, Carvalho DA, Oliveira-Filho AT and Curi N (2007). Effects of soils and topography on the distribution of tree species in a fragment of tropical seasonal forest in Luminarias, SE, Brazil. Árvore 31: 25-35. Saccheri I, Kuussaari M, Kankare M, Vikman P, et al. (1998). Inbreeding and extinction in a butterfly metapopulation. Nature 392: 491-494. doi:10.1038/33136 Schlüter PM and Harris SA (2006). Analysis of multilocus fingerprinting data sets containing missing data. Mol. Ecol. Notes 6: 569-572. doi:10.1111/j.1471-8286.2006.01225.x Schumutz J (1960). Phytochemische betrachtungen zum genus Apidosperma. Pharm. Acta Helv. 36: 103-118. Soares-Silva LH and Barroso GM (1992). Fitossociologia do Estrato Arbóreo da Floresta na Porção Norte do “Parque Estadual Mata dos Godoy”. Congresso da Sociedade Botânica de São Paulo, Londrina, 101-112. PMid:10692017 Takahashi M, Mukouda M and Koono K (2000). Differences in genetic structure between two Japanese beech (Fagus crenata Blume) stands. Heredity 84: 103-115. doi:10.1046/j.1365-2540.2000.00635.x PMid:12859630 Tero N, Aspi J, Siikamaki P, Jakalaniemi A, et al. (2003). Genetic structure and gene flow in a metapopulation of an endangered plant species, Silene tatarica. Mol. Ecol. 12: 2073-2085. doi:10.1046/j.1365-294X.2003.01898.x Torezan JMD, Souza RF, Ruas PM, Ruas CF, et al. (2005). Genetics variability of pre and post-fragmentation cohorts of Aspidosperma polineuron Muell. Arg. (Apocynaceae). Braz. Arch. Biol. Tech. 48: 171-180. doi:10.1590/S1516-89132005000200002 PMid:7501463    PMCid:307397 Vos P, Hogers R, Bleeker M, Reijans M, et al. (1995). AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res. 23: 4407-4414. doi:10.1093/nar/23.21.4407 Yeh FC, Yang R, Boyle TJ and Xiyan JM (2000). Pop Gene 32. Microsof Window-Based Freeware for Population Genetic Analysis. Molecular Biology and Biotechnology Center, University of Alberta, Edmonton, 32. PMid:10434412 Zhivotovsky LA (1999). Estimating population structure in diploids with multilocus dominant DNA markers. Mol. Ecol. 8: 907-913. doi:10.1046/j.1365-294x.1999.00620.x

Bailey-Serres J and Voesenek LA (2008). Flooding stress: acclimations and genetic diversity. Annu. Rev. Plant Biol. 59: 313-339. doi:10.1146/annurev.arplant.59.032607.092752 PMid:18444902 Braendle R and Crawford RMM (1999). Plants as amphibians. Perspect. Plant Ecol. Evol. Syst. 2: 56-78. doi:10.1078/1433-8319-00065 Carvalho MCCG, Silva DCG, Ruas PM, Medri ME, et al. (2002). Flooding tolerance and genetic diversity in populations of Luehea divaricata. Biol. Plant. 52: 771-774. doi:10.1007/s10535-008-0150-0 Coelho ASG (2000). Dboot: Avaliação dos Erros Associados a Estimativas de Distâncias/Similaridade Genéticas Através do Procedimento de Bootstrap com Número Variável de Marcadores (Software). Universidade Federal de Goiás, Goiânia. Doyle JJ and Doyle JL (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19: 11-15. Ferreira CS, Piedade MTF, Junk WJ and Parolin P (2007). Floodplain and upland populations of Amazonian Himatanthus sucuuba: effects of flooding on germination, seedling growth and mortality. Environ. Exp. Bot. 60: 477-483. doi:10.1016/j.envexpbot.2007.01.005 Ferreira CS, Piedade MTF, Franco AC, Gonçalves JFC, et al. (2009a). Adaptive strategies to tolerate prolonged flooding in seedlings of floodplain and upland populations of Himatanthus sucuuba, a Central Amazon tree. Aquatic. Bot. 90: 246-252. doi:10.1016/j.aquabot.2008.10.006 Ferreira CS, Piedade MT, Tine MA, Rossatto DR, et al. (2009b). The role of carbohydrates in seed germination and seedling establishment of Himatanthus sucuuba, an Amazonian tree with populations adapted to flooded and non-flooded conditions. Ann. Bot. 104: 1111-1119. doi:10.1093/aob/mcp212 PMid:19770164    PMCid:2766203 Jackson MB, Ishizawa K and Ito O (2009). Evolution and mechanisms of plant tolerance to flooding stress. Ann. Bot. 103: 137-142. doi:10.1093/aob/mcn242 PMCid:2707321 Krauss SL (2000). Accurate gene diversity estimates from amplified fragment length polymorphism (AFLP) markers. Mol. Ecol. 9: 1241-1245. doi:10.1046/j.1365-294x.2000.01001.x PMid:10972764 Lenssen JPM, Kleunen MV, Fischer M and Kroon H (2004). Local adaptation of the clonal plant Ranunculus reptans to flooding along a small-scale gradient. J. Ecol. 92: 696-706. doi:10.1111/j.0022-0477.2004.00895.x Nei M (1978). Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590. PMid:17248844    PMCid:1213855 Peña-Fronteras JT, Villalobos MC, Baltazar AM, Merca FE, et al. (2009). Adaptation to flooding in upland and lowland ecotypes of Cyperus rotundus, a troublesome sedge weed of rice: tuber morphology and carbohydrate metabolism. Ann. Bot. 103: 295-302. doi:10.1093/aob/mcn085 PMid:18515404    PMCid:2707299 Rohlf FJ (2000). NTSYS-pc Numerical Taxonomy and Multivariate Analysis System Version 2.1. Owner Manual. Exeter Software, New York. Schneider S, Roessli D and Excoffier L (2000). ARLEQUIN: A Software for Population Genetic data Analysis, Version 2.0 (software). University of Geneva, Geneva. Silva DC, Carvalho MC, Ruas PM, Ruas CF, et al. (2010). Evidence of ecotypic differentiation between populations of the tree species Parapiptadenia rigida due to flooding. Genet. Mol. Res. 9: 797-810. doi:10.4238/vol9-2gmr736 PMid:20449813 Silva MES and Guetter AK (2003). Mudanças climáticas regionais observadas no estado do Paraná. Terra Livre 1: 111- 126. Tero N, Aspi J, Siikamaki P, Jakalaniemi A, et al. (2003). Genetic structure and gene flow in a metapopulation of an endangered plant species, Silene tatarica. Mol. Ecol. 12: 2073-2085. doi:10.1046/j.1365-294X.2003.01898.x PMid:12859630 Yeh FC, Yang RTJ and Xiyan JM (2000). PopGene32. Microsoft Window-based Freeware for Population Genetic Analysis, Version 1.32 (Software). University of Alberta, Edmonton. Zhivotovsky LA (1999). Estimating population structure in diploids with multilocus dominant DNA markers. Mol. Ecol. 8: 907-913. doi:10.1046/j.1365-294x.1999.00620.x PMid:10434412

Ayres M, Ayres Jr M and Ayres DL (2005). Bioestat: 2.0 - Aplicações Estatísticas nas Áreas das Ciências Biológicas e Médicas. Sociedade Civil Mamirauá, MCT/CNPq, Belém. Castellen MS (2000). Uso de Marcadores RAPD e Isoenzimáticos na Quantificação da Diversidade Genética em Populações Naturais de Esenbeckia leiocarpa. PhD thesis, ESALQ-USP, Piracicaba. Dawson IK, Simons AJ, Waugh R and Powell W (1995). Diversity and genetic differentiation among subpopulations of Gliricidia sepium revealed by PCR-based assays. Heredity 74: 10-18. http://dx.doi.org/10.1038/hdy.1995.2 PMid:7531677 Doyle JJ and Doyle JL (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19: 11-15. Gaudeul M, Taberlet P and Till-Bottraud I (2000). Genetic diversity in an endangered alpine plant, Eryngium alpinum L. (Apiaceae), inferred from amplified fragment length polymorphism markers. Mol. Ecol. 9: 1625-1637. http://dx.doi.org/10.1046/j.1365-294x.2000.01063.x PMid:11050557 Hall P, Chase MR and Bawa KS (1994). Low genetic variation but high population differentiation in a common tropical forest tree species. Conserv. Biol. 8: 471-482. http://dx.doi.org/10.1046/j.1523-1739.1994.08020471.x Hamrick JL (1983). The Distribution of Genetic Variation Within and Among Natural Plant Populations. In: Genetic and Conservation (Schonewald Cox CM, Chambers SM, Macbride B and Thomas L, eds.). The Benjamin/Cummings Publishing, Menlo Park, 335-348. Hardy OJ (2003). Estimation of pairwise relatedness between individuals and characterization of isolation-by-distance processes using dominant genetic markers. Mol. Ecol. 12: 1577-1588. http://dx.doi.org/10.1046/j.1365-294X.2003.01835.x PMid:12755885 Hedrick P (1992). Shooting the rapids. Nature 355: 679-680. http://dx.doi.org/10.1038/355679a0 Holsinger KE and Lewis PO (2003). HICKORY: A Package for Analysis of Population Genetic Data, Version 1.0. Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs. Holsinger KE, Lewis PO and Dey DK (2002). A Bayesian approach to inferring population structure from dominant markers. Mol. Ecol. 11: 1157-1164. http://dx.doi.org/10.1046/j.1365-294X.2002.01512.x PMid:12074723 Hsiao JY and Lee SM (1999). Genetic diversity and microgeographic differentiation of Yushan cane (Yushania niitakayamensis; Poaceae) in Taiwan. Mol. Ecol. 8: 263-270. http://dx.doi.org/10.1046/j.1365-294X.1999.00563.x Knowles P (1984). Genetic variability among and within closely spaced populations of Lodgepole pine. Can. J. Genet. Cytol.26: 177-184. Krauss SL (2000). Accurate gene diversity estimates from amplified fragment length polymorphism (AFLP) markers. Mol. Ecol. 9: 1241-1245. http://dx.doi.org/10.1046/j.1365-294x.2000.01001.x PMid:10972764 Lacerda DR, Acedo MDP, Lemos Filho JP and Lovato MB (2001). Genetic diversity and structure of natural populations of Plathymenia reticulata (Mimosoidae), a tropical tree from the Brazilian Cerrado. Mol. Ecol. 10: 1143-1152. http://dx.doi.org/10.1046/j.1365-294X.2001.01264.x PMid:11380873 Lee SW, Ledig FT and Johnson DR (2002). Genetic variation at allozyme and RAPD markers in Pinus longaeva (Pinaceae) of the White Mountains, California. Am. J. Bot. 89: 566-577. http://dx.doi.org/10.3732/ajb.89.4.566 PMid:21665657 Lorenzi H (2002). Árvores Brasileiras: Manual de Identificação e Cultivo de Plantas Arbóreas Nativas do Brasil. Plantarum Press Nova Odessa, Nova Odessa. Lowe AJ, Boshier D, Ward M, Bacles CF, et al. (2005). Genetic resource impacts of habitat loss and degradation; reconciling empirical evidence and predicted theory for neotropical trees. Heredity 95: 255-273. http://dx.doi.org/10.1038/sj.hdy.6800725 PMid:16094300 Martins SV, Riveiro GA and da Silva WM (2002). Regeneração pós-fogo em fragmento de floresta estacional semidecidual no município de Viçosa, Minas Gerais. Cienc. Florestal 12: 11-19. Mendonça FA and Danni-Oliveira IM (2002). Dinâmica Atmosférica e Tipos Climáticos Predominantes da Bacia do Rio Tibagi. In: A Bacia do Rio Tibagi (Medri ME, Bianchini E, Shibatta AO and Pimenta JA, eds.). Londrina, 63-68. Mueller UG and Wolfenbarger LL (1999). AFLP genotyping and fingerprinting. Trends Ecol. Evol. 14: 389-394. http://dx.doi.org/10.1016/S0169-5347(99)01659-6 Nei M (1973). Analysis of gene diversity in subdivided populations. Proc. Natl. Acad. Sci. U. S. A. 70: 3321-3323. http://dx.doi.org/10.1073/pnas.70.12.3321 Nei M (1978). Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590. PMid:17248844    PMCid:1213855 Nei M (1987). Molecular Evolutionary Genetics. Columbia University Press, New York. Nybom H (2004). Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Mol. Ecol. 13: 1143-1155. http://dx.doi.org/10.1111/j.1365-294X.2004.02141.x PMid:15078452 Nybom H and Bartish IV (2000). Effects of life history traits and sampling strategies on genetic diversity estimates obtained with RAPD markers in plants. Perspect. Plant Ecol. 3: 93-114. http://dx.doi.org/10.1078/1433-8319-00006 Oliveira PEAM and Paula FR (2001). Fenologia e Biologia Reprodutiva de Plantas de Mata de Galeria. In: Cerrado: Caracterização e Recuperação de Matas de Galeria (Ribeiro JF, da Fonseca CEL and Souza-Silva JC, eds.). Embrapa- Cerrados, Planaltina, 301-322. Pinto SIC, Souza AM and Carvalho D (2004). Genetic variability by isozymes in populations of Copaifera langsdorffii Desf. in two fragments of riparian forest. Sci. Forestry 65: 40-48. Pritchard JK, Stephens M and Donnelly P (2000). Inference of population structure using multilocus genotype data. Genetics 155: 945-959. PMid:10835412    PMCid:1461096 Sales E, Nebauer SG, Mus M and Segura J (2001). Population genetic study in the Balearic endemic plant species Digitalis minor (Scrophulariaceae) using RAPD markers. Am. J. Bot. 88: 1750-1759. http://dx.doi.org/10.2307/3558349 PMid:21669606 Schierenbeck KA, Skupski M, Lieberman D and Lieberman M (1997). Population structure and genetic diversity in four tropical tree species in Costa Rica. Mol. Ecol. 6: 137-144. http://dx.doi.org/10.1046/j.1365-294X.1997.00166.x Schlüter PM and Harris SA (2006). Analysis of multilocus fingerprinting data sets containing missing data. Mol. Ecol. Notes 6: 569-572. http://dx.doi.org/10.1111/j.1471-8286.2006.01225.x Schneider S, Roessll D and Excoffier L (2000). ARLEQUIN: A software for population genetic data analysis, v. 2.0. Genetics and Biometry Laboratory, Department of Anthropology, University of Geneva, Geneva. Stipp NAF (2002). Principais Tipos de Solos da Bacia do Rio Tibagi. In: A Bacia do Rio Tibagi (Medri ME, Bianchini E, Shibatta AO and Pimenta JA, eds.). EDUEL, Londrina, 39-44. Sun M and Wong KC (2001). Genetic structure of three orchid species with contrasting breeding systems using RAPD and allozyme markers. Am. J. Bot. 88: 2180-2188. http://dx.doi.org/10.2307/3558379 PMid:21669650 Tero N, Aspi J, Siikamaki P, Jakalaniemi A, et al. (2003). Genetic structure and gene flow in a metapopulation of an endangered plant species, Silene tatarica. Mol. Ecol. 12: 2073-2085. http://dx.doi.org/10.1046/j.1365-294X.2003.01898.x PMid:12859630 Torezan JMD (2002). Nota Sobre a Vegetação da Bacia do Rio Tibagi. In: A Bacia do Rio Tibagi (Medri ME, Bianchini E, Shibatta AO and Pimenta JA, eds.). EDUEL, Londrina, 103-108. Wallace LE (2002). Examining the effects of fragmentation on genetic variation in Platanthera leucophaea (Orchidaceae): inferences from allozyme and random amplified polymorphic DNA markers. Plant Species Biol. 17: 37-49. http://dx.doi.org/10.1046/j.1442-1984.2002.00072.x Yeh F, Yang R and Boyle TJ (2000). PopGene 3.12. Microsoft Window-based Freeware for Population Genetic Analysis, Version 1.32, Molecular Biology and Biotechnology Centre, University of Alberta, Edmonton. Zhivotovsky LA (1999). Estimating population structure in diploids with multilocus dominant DNA markers. Mol. Ecol. 8: 907-913. http://dx.doi.org/10.1046/j.1365-294x.1999.00620.x PMid:10434412 Zimback L, Mori ES, Kageyama PY, Veiga RFA, et al. (2004). Estrutura genética de populações de Trichilia pallida Swartz (Meliaceae) por marcadores RAPD. Sci. Forestry 65: 114-119.