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“A transient assay for recombination demonstrates that Arabidopsis SNM1 and XRCC3 enhance non-homologous recombination”, vol. 10, pp. 2104-2132, 2011.
, Bleuyard JY and White CI (2004). The Arabidopsis homologue of Xrcc3 plays an essential role in meiosis. EMBO J. 23: 439-449.
http://dx.doi.org/10.1038/sj.emboj.7600055
PMid:14726957 PMCid:1271761
Bleuyard JY, Gallego ME and White CI (2006). Recent advances in understanding of the DNA double-strand break repair machinery of plants. DNA Repair 5: 1-12.
http://dx.doi.org/10.1016/j.dnarep.2005.08.017
PMid:16202663
Brenneman MA, Weiss AE, Nickoloff JA and Chen DJ (2000). XRCC3 is required for efficient repair of chromosome breaks by homologous recombination. Mutat. Res. 459: 89-97.
PMid:10725659
Brenneman MA, Wagener BM, Miller CA, Allen C, et al. (2002). XRCC3 controls the fidelity of homologous recombination: roles for XRCC3 in late stages of recombination. Mol. Cell 10: 387-395.
http://dx.doi.org/10.1016/S1097-2765(02)00595-6
Britt AB and May GD (2003). Re-engineering plant gene targeting. Trends Plant Sci. 8: 90-95.
http://dx.doi.org/10.1016/S1360-1385(03)00002-5
Childs KL, Hamilton JP, Zhu W, Ly E, et al. (2007). The TIGR plant transcript assemblies database. Nucleic Acids Res. 35: D846-D851.
http://dx.doi.org/10.1093/nar/gkl785
PMid:17088284 PMCid:1669722
Chung BY, Simons C, Firth AE, Brown CM, et al. (2006). Effect of 5' UTR introns on gene expression in Arabidopsis thaliana. BMC Genomics 7: 120.
http://dx.doi.org/10.1186/1471-2164-7-120
PMid:16712733 PMCid:1482700
Coates D, Taliercio EW and Gelvin SB (1987). Chromatin structure of integrated T-DNA in crown gall tumors. Plant Mol. Biol. 8: 159-168.
http://dx.doi.org/10.1007/BF00025327
Cotsaftis O and Guiderdoni E (2005). Enhancing gene targeting efficiency in higher plants: rice is on the move. Transgenic Res. 14: 1-14.
http://dx.doi.org/10.1007/s11248-004-4066-y
PMid:15865044
Di Primo C, Galli A, Cervelli T, Zoppe M, et al. (2005). Potentiation of gene targeting in human cells by expression of Saccharomyces cerevisiae Rad52. Nucleic Acids Res. 33: 4639-4648.
http://dx.doi.org/10.1093/nar/gki778
PMid:16106043 PMCid:1187822
Dray E, Siaud N, Dubois E and Doutriaux MP (2006). Interaction between Arabidopsis Brca2 and its partners Rad51, Dmc1, and Dss1. Plant Physiol. 140: 1059-1069.
http://dx.doi.org/10.1104/pp.105.075838
PMid:16415210 PMCid:1400560
Durrant WE, Wang S and Dong X (2007). Arabidopsis SNI1 and RAD51D regulate both gene transcription and DNA recombination during the defense response. Proc. Natl. Acad. Sci. U. S. A. 104: 4223-4227.
http://dx.doi.org/10.1073/pnas.0609357104
PMid:17360504 PMCid:1820736
Forget AL, Bennett BT and Knight KL (2004). Xrcc3 is recruited to DNA double strand breaks early and independent of Rad51. J. Cell. Biochem. 93: 429-436.
http://dx.doi.org/10.1002/jcb.20232
PMid:15372620
Fuller LF and Painter RB (1988). A Chinese hamster ovary cell line hypersensitive to ionizing radiation and deficient in repair replication. Mutat. Res. 193: 109-121.
PMid:3347204
Gelvin SB (2003). Agrobacterium-mediated plant transformation: the biology behind the “gene-jockeying” tool. Microbiol. Mol. Biol. Rev. 67: 16-37, table.
http://dx.doi.org/10.1128/MMBR.67.1.16-37.2003
PMid:12626681 PMCid:150518
Gorbunova V, Avivi-Ragolski N, Shalev G, Kovalchuk I, et al. (2000). A new hyperrecombinogenic mutant of Nicotiana tabacum. Plant J. 24: 601-611.
http://dx.doi.org/10.1046/j.1365-313x.2000.00905.x
PMid:11123799
Hanin M, Mengiste T, Bogucki A and Paszkowski J (2000). Elevated levels of intrachromosomal homologous recombination in Arabidopsis overexpressing the MIM gene. Plant J. 24: 183-189.
http://dx.doi.org/10.1046/j.1365-313x.2000.00867.x
PMid:11069693
Hellens RP, Allan AC, Friel EN, Bolitho K, et al. (2005). Transient expression vectors for functional genomics, quantification of promoter activity and RNA silencing in plants. Plant Methods 1: 13.
http://dx.doi.org/10.1186/1746-4811-1-13
PMid:16359558 PMCid:1334188
Hemphill AW, Bruun D, Thrun L, Akkari Y, et al. (2008). Mammalian SNM1 is required for genome stability. Mol. Genet. Metab. 94: 38-45.
http://dx.doi.org/10.1016/j.ymgme.2007.11.012
PMid:18180189 PMCid:2413150
Hrouda M and Paszkowski J (1994). High fidelity extrachromosomal recombination and gene targeting in plants. Mol. Gen. Genet. 243: 106-111.
http://dx.doi.org/10.1007/BF00283882
Iida S and Terada R (2005). Modification of endogenous natural genes by gene targeting in rice and other higher plants. Plant Mol. Biol. 59: 205-219.
http://dx.doi.org/10.1007/s11103-005-2162-x
PMid:16217613
Ilnytskyy Y, Boyko A and Kovalchuk I (2004). Luciferase-based transgenic recombination assay is more sensitive than beta-glucoronidase-based. Mutat. Res. 559: 189-197.
PMid:15066586
Kim SI and Gelvin SB (2007). Genome-wide analysis of Agrobacterium T-DNA integration sites in the Arabidopsis genome generated under non-selective conditions. Plant J. 51: 779-791.
http://dx.doi.org/10.1111/j.1365-313X.2007.03183.x
PMid:17605756
Kimura S, Saotome A, Uchiyama Y, Mori Y, et al. (2005). The expression of the rice (Oryza sativa L.) homologue of Snm1 is induced by DNA damages. Biochem. Biophys. Res. Commun. 329: 668-672.
http://dx.doi.org/10.1016/j.bbrc.2005.01.161
PMid:15737637
Kurumizaka H, Ikawa S, Nakada M, Eda K, et al. (2001). Homologous-pairing activity of the human DNA-repair proteins Xrcc3.Rad51C. Proc. Natl. Acad. Sci. U. S. A. 98: 5538-5543.
http://dx.doi.org/10.1073/pnas.091603098
PMid:11331762 PMCid:33248
Li L, Santerre-Ayotte S, Boivin EB, Jean M, et al. (2004). A novel reporter for intrachromosomal homoeologous recombination in Arabidopsis thaliana. Plant J. 40: 1007-1015.
http://dx.doi.org/10.1111/j.1365-313X.2004.02270.x
PMid:15584964
Li X and Moses RE (2003). The β-lactamase motif in Snm1 is required for repair of DNA double-strand breaks caused by interstrand crosslinks in S. cerevisiae. DNA Repair 2: 121-129.
http://dx.doi.org/10.1016/S1568-7864(02)00192-1
Li X, Hejna J and Moses RE (2005). The yeast Snm1 protein is a DNA 5’-exonuclease. DNA Repair 4: 163-170.
http://dx.doi.org/10.1016/j.dnarep.2004.08.012
PMid:15590324
Lyznik LA, McGee JD, Tung PY, Bennetzen JL, et al. (1991). Homologous recombination between plasmid DNA molecules in maize protoplasts. Mol. Gen. Genet. 230: 209-218.
http://dx.doi.org/10.1007/BF00290670
Molinier J, Stamm ME and Hohn B (2004). SNM-dependent recombinational repair of oxidatively induced DNA damage in Arabidopsis thaliana. EMBO Rep. 5: 994-999.
http://dx.doi.org/10.1038/sj.embor.7400256
PMid:15448639 PMCid:1299156
Orel N and Puchta H (2003). Differences in the processing of DNA ends in Arabidopsis thaliana and tobacco: possible implications for genome evolution. Plant Mol. Biol. 51: 523-531.
http://dx.doi.org/10.1023/A:1022324205661
PMid:12650618
Osakabe K, Yoshioka T, Ichikawa H and Toki S (2002). Molecular cloning and characterization of RAD51-like genes from Arabidopsis thaliana. Plant Mol. Biol. 50: 71-81.
http://dx.doi.org/10.1023/A:1016047231597
Puchta H and Hohn B (1991). A transient assay in plant cells reveals a positive correlation between extrachromosomal recombination rates and length of homologous overlap. Nucleic Acids Res. 19: 2693-2700.
http://dx.doi.org/10.1093/nar/19.10.2693
PMid:2041745 PMCid:328188
Reiss B, Klemm M, Kosak H and Schell J (1996). RecA protein stimulates homologous recombination in plants. Proc. Natl. Acad. Sci. U. S. A. 93: 3094-3098.
http://dx.doi.org/10.1073/pnas.93.7.3094
Schuermann D, Molinier J, Fritsch O and Hohn B (2005). The dual nature of homologous recombination in plants. Trends Genet. 21: 172-181.
http://dx.doi.org/10.1016/j.tig.2005.01.002
PMid:15734576
Shaked H, Melamed-Bessudo C and Levy AA (2005). High-frequency gene targeting in Arabidopsis plants expressing the yeast RAD54 gene. Proc. Natl. Acad. Sci. U. S. A. 102: 12265-12269.
http://dx.doi.org/10.1073/pnas.0502601102
PMid:16093317 PMCid:1189313
Shaked H, Avivi-Ragolsky N and Levy AA (2006). Involvement of the Arabidopsis SWI2/SNF2 chromatin remodeling gene family in DNA damage response and recombination. Genetics 173: 985-994.
http://dx.doi.org/10.1534/genetics.105.051664
PMid:16547115 PMCid:1526515
Shalev G, Sitrit Y, Avivi-Ragolski N, Lichtenstein C, et al. (1999). Stimulation of homologous recombination in plants by expression of the bacterial resolvase RuvC. Proc. Natl. Acad Sci U. S. A. 96: 7398-7402.
http://dx.doi.org/10.1073/pnas.96.13.7398
Tebbs RS, Zhao Y, Tucker JD, Scheerer JB, et al. (1995). Correction of chromosomal instability and sensitivity to diverse mutagens by a cloned cDNA of the XRCC3 DNA repair gene. Proc. Natl. Acad. Sci. U. S. A. 92: 6354-6358.
http://dx.doi.org/10.1073/pnas.92.14.6354
Ursin VM, Irvine JM, Hiatt WR and Shewmaker CK (1991). Developmental analysis of elongation factor-1 alpha expression in transgenic tobacco. Plant Cell 3: 583-591.
PMid:1841719 PMCid:160026