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2013
B. Z. Feng and Li, P. Q., Molecular characterization and functional analysis of the Nep1-like protein-encoding gene from Phytophthora capsici, vol. 12, pp. 1468-1478, 2013.
Bailey BA (1995). Purification of a protein from culture filtrates of Fusarium oxysporum that induces ethylene and necrosis in leaves of Erythroxylum coca. Phytopathology 85: 1250-1255. http://dx.doi.org/10.1094/Phyto-85-1250   Bailey BA, Bae H, Strem MD, Antúnez de Mayolo G, et al. (2005). Developmental expression of stress response genes in Theobroma cacao leaves and their response to Nep1 treatment and a compatible infection by Phytophthora megakarya. Plant Physiol. Biochem. 43: 611-622. http://dx.doi.org/10.1016/j.plaphy.2005.04.006 PMid:15979314   Baldauf SL, Roger AJ, Wenk-Siefert I and Doolittle WF (2000). A kingdom-level phylogeny of eukaryotes based on combined protein data. Science 290: 972-977. http://dx.doi.org/10.1126/science.290.5493.972 PMid:11062127   Chisholm ST, Coaker G, Day B and Staskawicz BJ (2006). Host-microbe interactions: shaping the evolution of the plant immune response. Cell 124: 803-814. http://dx.doi.org/10.1016/j.cell.2006.02.008 PMid:16497589   Dean RA, Talbot NJ, Ebbole DJ, Farman ML, et al. (2005). The genome sequence of the rice blast fungus Magnaporthe grisea. Nature 434: 980-986. http://dx.doi.org/10.1038/nature03449 PMid:15846337   Ellis JG, Rafiqi M, Gan P, Chakrabarti A, et al. (2009). Recent progress in discovery and functional analysis of effector proteins of fungal and oomycete plant pathogens. Curr. Opin. Plant Biol. 12: 399-405. http://dx.doi.org/10.1016/j.pbi.2009.05.004 PMid:19540152   Fellbrich G, Romanski A, Varet A, Blume B, et al. (2002). NPP1, a Phytophthora-associated trigger of plant defense in parsley and Arabidopsis. Plant J. 32: 375-390. http://dx.doi.org/10.1046/j.1365-313X.2002.01454.x PMid:12410815   Feng B, Li P, Wang H and Zhang X (2010). Functional analysis of pcpme6 from oomycete plant pathogen Phytophthora capsici. Microb. Pathog. 49: 23-31. http://dx.doi.org/10.1016/j.micpath.2010.03.004 PMid:20227480   Feng J, Wang K, Liu X, Chen S, et al. (2009). The quantification of tomato microRNAs response to viral infection by stem-loop real-time RT-PCR. Gene 437: 14-21. http://dx.doi.org/10.1016/j.gene.2009.01.017 PMid:19374024   Gabriel DW (1989). The Genetics of Plant Pathogen Population Structure and Host-Parasite Specificity. In: Plant-Microbe Interactions: Molecular and Genetic Perspectives (Kosuge T and Nester EW, eds.). Macmillan, New York, 343-379.   Garcia O, Macedo JA, Tibúrcio R, Zaparoli G, et al. (2007). Characterization of necrosis and ethylene-inducing proteins (NEP) in the basidiomycete Moniliophthora perniciosa, the causal agent of witches' broom in Theobroma cacao. Mycol. Res. 111: 443-455. http://dx.doi.org/10.1016/j.mycres.2007.01.017 PMid:17512713   Gerrettson-Cornell (1989). A Compendium and Classification of the Species of the Genus Phytophthora de Barry by the Canons of Traditional Taxonmy. Forestry Commission of New South Wales, West Pennant Hills, Australia, 45.   Gijzen M and Nürnberger T (2006). Nep1-like proteins from plant pathogens: recruitment and diversification of the NPP1 domain across taxa. Phytochemistry 67: 1800-1807. http://dx.doi.org/10.1016/j.phytochem.2005.12.008 PMid:16430931   Hogenhout SA, Van der Hoorn RA, Terauchi R and Kamoun S (2009). Emerging concepts in effector biology of plant-associated organisms. Mol. Plant Microbe Interact. 22: 115-122. http://dx.doi.org/10.1094/MPMI-22-2-0115 PMid:19132864   Huang G, Gao B, Maier T, Allen R, et al. (2003). A profile of putative parasitism genes expressed in the esophageal gland cells of the root-knot nematode Meloidogyne incognita. Mol. Plant Microbe Interact. 16: 376-381. http://dx.doi.org/10.1094/MPMI.2003.16.5.376 PMid:12744507   Jennings JC, Apel-Birkhold PC, Bailey BA and Anderson JD (2000). Induction of ethylene biosynthesis and necrosis in weed leaves by a Fusarium oxysporum protein. Weed Sci. 48: 7-14. http://dx.doi.org/10.1614/0043-1745(2000)048[0007:IOEBAN]2.0.CO;2   Jones L, Hamilton AJ, Voinnet O, Thomas CL, et al. (1999). RNA-DNA interactions and DNA methylation in post-transcriptional gene silencing. Plant Cell 11: 2291-2301. PMid:10590159 PMCid:144133   Kamoun S (2006). A catalogue of the effector secretome of plant pathogenic oomycetes. Annu. Rev. Phytopathol. 44: 41-60. http://dx.doi.org/10.1146/annurev.phyto.44.070505.143436 PMid:16448329   Kamoun S (2007). Groovy times: filamentous pathogen effectors revealed. Curr. Opin. Plant Biol. 10: 358-365. http://dx.doi.org/10.1016/j.pbi.2007.04.017 PMid:17611143   Lamour KH and Hausbeck MK (2004). Phytophthora capsici on vegetable crops: Research progress and management challenges. Plant Dis. 88: 1292-1303. http://dx.doi.org/10.1094/PDIS.2004.88.12.1292   Leonian LH (1922). Stem and fruit blight of peppers caused by Phytophthora capsici sp. nov. Phytopathology 12: 401-408.   Motteram J, Küfner I, Deller S, Brunner F, et al. (2009). Molecular characterization and functional analysis of MgNLP, the sole NPP1 domain-containing protein, from the fungal wheat leaf pathogen Mycosphaerella graminicola. Mol. Plant Microbe Interact. 22: 790-799. http://dx.doi.org/10.1094/MPMI-22-7-0790 PMid:19522561   Nicholas KB, Nicholas JHB and DeerfieldII DW (1997). GeneDoc: Analysis and Visualization of Genetic Variation EMBNEW. NEWS 4: 14.   Ottmann C, Luberacki B, Küfner I, Kocha W, et al. (2009). A common toxin fold mediates microbial attack and plant defense. Proc. Nat. Acad. Sci. U. S. A. 106: 10359-10364. http://dx.doi.org/10.1073/pnas.0902362106 PMid:19520828 PMCid:2695407   Pare PW, Farag MA, Krishnamachari V, Zhang H, et al. (2005). Elicitors and priming agents initiate plant defense responses. Photosynth. Res. 85: 149-159. http://dx.doi.org/10.1007/s11120-005-1001-x PMid:16075316   Pemberton CL and Salmond GP (2004). The Nep1-like proteins-a growing family of microbial elicitors of plant necrosis. Mol. Plant Pathol. 5: 353-359. http://dx.doi.org/10.1111/j.1364-3703.2004.00235.x PMid:20565603   Qutob D, Kamoun S and Gijzen M (2002). Expression of a Phytophthora sojae necrosis-inducing protein occurs during transition from biotrophy to necrotrophy. Plant J. 32: 361-373. http://dx.doi.org/10.1046/j.1365-313X.2002.01439.x PMid:12410814   Rozen S and Skaletsky H (2000). Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol. 132: 365-386. PMid:10547847   Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, et al. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25: 4876-4882. http://dx.doi.org/10.1093/nar/25.24.4876 PMid:9396791 PMCid:147148   Vandesompele J, De Preter K, Pattyn F, Poppe B, et al. (2002). Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol. 3: RESEARCH0034.   Wang JY, Cai Y, Gou JY, Mao YB, et al. (2004). VdNEP, an elicitor from Verticillium dahliae, induces cotton plant wilting. Appl. Environ. Microbiol. 70: 4989-4995. http://dx.doi.org/10.1128/AEM.70.8.4989-4995.2004 PMid:15294839 PMCid:492334   Wu CH, Yan HZ, Liu LF and Liou RF (2008). Functional characterization of a gene family encoding polygalacturonases in Phytophthora parasitica. Mol. Plant Microbe Interact. 21: 480-489. http://dx.doi.org/10.1094/MPMI-21-4-0480 PMid:18321193
2011
B. Z. Feng, Li, P. Q., Fu, L., Sun, B. B., and Zhang, X. G., Identification of 18 genes encoding necrosis-inducing proteins from the plant pathogen Phytophthora capsici (Pythiaceae: Oomycetes), vol. 10. pp. 910-922, 2011.
Bae H, Bowers JH, Tooley PW and Bailey BA (2005). NEP1 orthologs encoding necrosis and ethylene inducing proteins exist as a multigene family in Phytophthora megakarya, causal agent of black pod disease on cacao. Mycol. Res. 109: 1373-1385. doi:10.1017/S0953756205003941 PMid:16353637 Bailey BA (1995). Purification of a protein from culture filtrates of Fusarium oxysporm that induces ethylene and necrosis in leaves of Erythroloxylum coca. Phytopathology 85: 1250-1255. doi:10.1094/Phyto-85-1250 Bailey BA, Bae H, Strem MD, Antunez de Mayolo G, et al. (2005). Developmental expression of stress response genes in Theobroma cacao leaves and their response to Nep1 treatment and a compatible infection by Phytophthora megakarya. Plant Physiol. Biochem. 43: 611-622. doi:10.1016/j.plaphy.2005.04.006 PMid:15979314 Baldauf SL, Roger AJ, Wenk-Siefert I and Doolittle WF (2000). A kingdom-level phylogeny of eukaryotes based on combined protein data. Science 290: 972-977. doi:10.1126/science.290.5493.972 PMid:11062127 Dean RA, Talbot NJ, Ebbole DJ, Farman ML, et al. (2005). The genome sequence of the rice blast fungus Magnaporthe grisea. Nature 434: 980-986. doi:10.1038/nature03449 PMid:15846337 Fellbrich G, Romanski A, Varet A, Blume B, et al. (2002). NPP1, a Phytophthora-associated trigger of plant defense in parsley and Arabidopsis. Plant J. 32: 375-390. doi:10.1046/j.1365-313X.2002.01454.x PMid:12410815 Feng B, Li P, Wang H and Zhang X (2010). Functional analysis of Pcpme6 from oomycete plant pathogen Phytophthora capsici. Microb. Pathog. 49: 23-31. doi:10.1016/j.micpath.2010.03.004 PMid:20227480 Galagan JE, Calvo SE, Borkovich KA, Selker EU, et al. (2003). The genome sequence of the filamentous fungus Neurospora crassa. Nature 422: 859-868. doi:10.1038/nature01554 PMid:12712197 Galagan JE, Calvo SE, Cuomo C, Ma LJ, et al. (2005). Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature 438: 1105-1115. doi:10.1038/nature04341 PMid:16372000 Garcia O, Macedo JA, Tiburcio R, Zaparoli G, et al. (2007). Characterization of necrosis and ethylene-inducing proteins (NEP) in the basidiomycete Moniliophthora perniciosa, the causal agent of witches’ broom in Theobroma cacao. Mycol. Res. 111: 443-455. doi:10.1016/j.mycres.2007.01.017 PMid:17512713 Garzón-Ospina D, Cadavid LF and Patarroyo MA (2010). Differential expansion of the merozoite surface protein (msp)-7 gene family in Plasmodium species under a birth-and-death model of evolution. Mol. Phylogenet. Evol. 55: 399-408. doi:10.1016/j.ympev.2010.02.017 PMid:20172030 Gijzen M and Nurnberger T (2006). Nep1-like proteins from plant pathogens: recruitment and diversification of the NPP1 domain across taxa. Phytochemistry 67: 1800-1807. doi:10.1016/j.phytochem.2005.12.008 PMid:16430931 Jennings JC, Apel-Birkhold PC, Bailey BA and Anderson JD (2000). Induction of ethylene biosynthesis and necrosis in weed leaves by a Fusarium oxysporum protein. Weed Sci. 48: 7-14. doi:10.1614/0043-1745(2000)048[0007:IOEBAN]2.0.CO;2 Lamour KH and Hausbeck MK (2004). Phytophthora capsici on vegetable crops: research progress and management challenges. Plant Dis. 88: 1292-1303. doi:10.1094/PDIS.2004.88.12.1292 Nei M and Rooney AP (2005). Concerted and birth-and-death evolution of multigene families. Annu. Rev. Genet. 39: 121-152. doi:10.1146/annurev.genet.39.073003.112240 PMid:16285855    PMCid:1464479 Ottmann C, Luberacki B, Küfner I, Koch W, et al. (2009). A common toxin fold mediates microbial attack and plant defense. Proc. Natl. Acad. Sci. U. S. A. 106: 10359-10364. doi:10.1073/pnas.0902362106 PMid:19520828    PMCid:2695407 Pare PW, Farag MA, Krishnamachari V, Zhang H, et al. (2005). Elicitors and priming agents initiate plant defense responses. Photosynth. Res. 85: 149-159. doi:10.1007/s11120-005-1001-x PMid:16075316 Pemberton CL and Salmond GP (2004). The Nep1-like proteins-a growing family of microbial elicitors of plant necrosis. Mol. Plant. Pathol. 5: 353-359. doi:10.1111/j.1364-3703.2004.00235.x PMid:20565603 Qutob D, Kamoun S and Gijzen M (2002). Expression of a Phytophthora sojae necrosis-inducing protein occurs during transition from biotrophy to necrotrophy. Plant J. 32: 361-373. doi:10.1046/j.1365-313X.2002.01439.x PMid:12410814 Qutob D, Kemmerling B, Brunner F, Küfner I, et al. (2006). Phytotoxicity and innate immune responses induced by Nep1- like proteins. Plant Cell 18: 3721-3744. doi:10.1105/tpc.106.044180 PMid:17194768    PMCid:1785393 Tyler BM, Forster H and Coffey MD (1995). Inheritance of avirulence factors and restriction fragment length polymorphism markers in outcrosses of the oomycete Phytophthora sojae. Mol. Plant Microbe Interact. 8: 515-523. doi:10.1094/MPMI-8-0515 Tyler BM, Tripathy S, Zhang X, Dehal P, et al. (2006). Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis. Science 313: 1261-1266. doi:10.1126/science.1128796 PMid:16946064 Wang JY, Cai Y, Gou JY, Mao YB, et al. (2004). VdNEP, an elicitor from Verticillium dahliae, induces cotton plant wilting. Appl. Environ. Microbiol. 70: 4989-4995. doi:10.1128/AEM.70.8.4989-4995.2004 PMid:15294839    PMCid:492334