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“Molecular characterization and structure analysis of RPL10/QM-like protein from the red drum Sciaenops ocellatus (Sciaenidae)”, vol. 10, pp. 576-587, 2011.
, Arnold K, Bordoli L, Kopp J and Schwede T (2006). The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling. Bioinformatics 22: 195-201.
doi:10.1093/bioinformatics/bti770
PMid:16301204
Buonocore F, Prugnoli D, Falasca C, Secombes CJ, et al. (2003). Peculiar gene organisation and incomplete splicing of sea bass (Dicentrarchus labrax L.) interleukin-1beta. Cytokine 21: 257-264.
doi:10.1016/S1043-4666(03)00095-4
Chen C, Wanduragala S, Becker DF and Dickman MB (2006). Tomato QM-like protein protects Saccharomyces cerevisiae cells against oxidative stress by regulating intracellular proline levels. Appl. Environ. Microbiol. 72: 4001-4006.
doi:10.1128/AEM.02428-05
PMid:16751508 PMCid:1489650
Dowdy SF, Lai KM, Weissman BE, Matsui Y, et al. (1991). The isolation and characterization of a novel cDNA demonstrating an altered mRNA level in nontumorigenic Wilms’ microcell hybrid cells. Nucleic Acids Res. 19: 5763-5769.
doi:10.1093/nar/19.20.5763
PMid:1658743 PMCid:328988
Dresios J, Panopoulos P and Synetos D (2006). Eukaryotic ribosomal proteins lacking a eubacterial counterpart: important players in ribosomal function. Mol. Microbiol. 59: 1651-1663.
doi:10.1111/j.1365-2958.2006.05054.x
PMid:16553873
Farmer AA, Loftus TM, Mills AA, Sato KY, et al. (1994). Extreme evolutionary conservation of QM, a novel c-Jun associated transcription factor. Hum. Mol. Genet. 3: 723-728.
doi:10.1093/hmg/3.5.723
PMid:8081358
Green H, Canfield AE, Hillarby MC, Grant ME, et al. (2000). The ribosomal protein QM is expressed differentially during vertebrate endochondral bone development. J. Bone Miner. Res. 15: 1066-1075.
doi:10.1359/jbmr.2000.15.6.1066
PMid:10841175
Griaznova O and Traut RR (2000). Deletion of C-terminal residues of Escherichia coli ribosomal protein L10 causes the loss of binding of one L7/L12 dimer: ribosomes with one L7/L12 dimer are active. Biochemistry 39: 4075-4081.
doi:10.1021/bi992621e
PMid:10747797
Imafuku I, Masaki T, Waragai M, Takeuchi S, et al. (1999). Presenilin 1 suppresses the function of c-Jun homodimers via interaction with QM/Jif-1. J. Cell Biol. 147: 121-134.
doi:10.1083/jcb.147.1.121
PMid:10508860 PMCid:2164975
Inada H, Mukai J, Matsushima S and Tanaka T (1997). QM is a novel zinc-binding transcription regulatory protein: its binding to c-Jun is regulated by zinc ions and phosphorylation by protein kinase C. Biochem. Biophys. Res. Commun. 230: 331-334.
doi:10.1006/bbrc.1996.5955
PMid:9016777
Kiefer F, Arnold K, Kunzli M, Bordoli L, et al. (2009). The SWISS-MODEL Repository and associated resources. Nucleic Acids Res. 37: D387-D392.
doi:10.1093/nar/gkn750
PMid:18931379 PMCid:2686475
Koller HT, Klade T, Ellinger A and Breitenbach M (1996). The yeast growth control gene GRC5 is highly homologous to the mammalian putative tumor suppressor gene QM. Yeast 12: 53-65.
doi:10.1002/(SICI)1097-0061(199601)12:1<53::AID-YEA886>3.0.CO;2-M
Kopp J and Schwede T (2004). The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models. Nucleic Acids Res. 32: D230-D234.
doi:10.1093/nar/gkh008
PMid:14681401 PMCid:308743
Kopp J and Schwede T (2006). The SWISS-MODEL Repository: new features and functionalities. Nucleic Acids Res. 34: D315-D318.
doi:10.1093/nar/gkj056
PMid:16381875 PMCid:1347419
Korostelev A, Trakhanov S, Laurberg M and Noller HF (2006). Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements. Cell 126: 1065-1077.
doi:10.1016/j.cell.2006.08.032
PMid:16962654
Lillico SG, Mottram JC, Murphy NB and Welburn SC (2002). Characterisation of the QM gene of Trypanosoma brucei. FEMS Microbiol. Lett. 211: 123-128.
doi:10.1111/j.1574-6968.2002.tb11213.x
PMid:12076801
Marty I, Brugidou C, Chartier Y and Meyer Y (1993). Growth-related gene expression in Nicotiana tabacum mesophyll protoplasts. Plant J. 4: 265-278.
doi:10.1046/j.1365-313X.1993.04020265.x
PMid:8220482
Melo F and Feytmans E (1998). Assessing protein structures with a non-local atomic interaction energy. J. Mol. Biol. 277: 1141-1152.
doi:10.1006/jmbi.1998.1665
PMid:9571028
Monteclaro FS and Vogt PK (1993). A Jun-binding protein related to a putative tumor suppressor. Proc. Natl. Acad. Sci. U.S.A. 90: 6726-6730.
doi:10.1073/pnas.90.14.6726
Nishimura M, Kaminishi T, Kawazoe M, Shirouzu M, et al. (2007). Purification, crystallization and preliminary X-ray diffraction study of human ribosomal protein L10 core domain. Acta Crystallogr. Sect. F. Struct. Biol. Cryst. Commun. 63: 950-952.
doi:10.1107/S1744309107048142
PMid:18007048 PMCid:2339757
Nishimura M, Kaminishi T, Takemoto C, Kawazoe M, et al. (2008). Crystal structure of human ribosomal protein L10 core domain reveals eukaryote-specific motifs in addition to the conserved fold. J. Mol. Biol. 377: 421-430.
doi:10.1016/j.jmb.2008.01.003
PMid:18258260
Park S and Jeong DG (2006). Ribosomal protein L10 interacts with the SH3 domain and regulates GDNF-induced neurite growth in SH-SY-5y cells. J. Cell Biochem. 99: 624-634.
doi:10.1002/jcb.20888
PMid:16741966
Saitou N and Nei M (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
PMid:3447015
Sambrook J and Russell DW (2001). Molecular Cloning 3. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, 644-656.
Scotto-Lavino E, Du G and Frohman MA (2006). 5’ end cDNA amplification using classic RACE. Nat. Protoc. 1: 2555- 2562.
doi:10.1038/nprot.2006.480
PMid:17406509
Tamura K, Dudley J, Nei M and Kumar S (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599.
doi:10.1093/molbev/msm092
PMid:17488738
Tron T, Yang M, Dick FA, Schmitt ME, et al. (1995). QSR1, an essential yeast gene with a genetic relationship to a subunit of the mitochondrial cytochrome bc1 complex, is homologous to a gene implicated in eukaryotic cell differentiation. J. Biol. Chem. 270: 9961-9970.
doi:10.1074/jbc.270.17.9961
PMid:7730379
Wen Y, Shao JZ, Pan XX and Xiang LX (2005). Molecular cloning, characterization and expression analysis of QM gene from grass carp (Ctenopharyngodon idellus) homologous to Wilms’ tumor suppressor. Comp. Biochem. Physiol. B Biochem. Mol. Biol. 141: 356-365.
doi:10.1016/j.cbpc.2005.04.007
PMid:15936234