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2013
A. Gonela, Sebbenn, A. M., Soriani, H. H., Mestriner, M. A., Martinez, C. A., and Alzate-Marin, A. L., Genetic diversity and mating system of Copaifera langsdorffii (Leguminosae/Caesalpinioideae), vol. 12, pp. 569-580, 2013.
Almeida SP, Proença CEB, Sano SM and Ribeiro LF (1998). Cerrado - Espécies Vegetais Úteis. CPAC - Embrapa, Planaltina.   Alves RM, Artero AS, Sebbenn AM and Figueira A (2003). Mating system in natural population of Theobroma grandiflorum (Willd. ex Spreng.) Shumm., by microsatellite markers. Genet. Mol. Biol. 26: 373-379. http://dx.doi.org/10.1590/S1415-47572003000300025   Alzate-Marin AL, Guidugli MC, Soriani HH, Martinez CA, et al. (2009). An efficient and rapid DNA minipreparation procedure suitable for PCR/SSR and RAPD analyses in tropical forest tree species. Braz. Arch. Biol. Technol. 52: 1217-1224. http://dx.doi.org/10.1590/S1516-89132009000500020   Ashley MV (2010). Plant parentage, pollination, and dispersal: How DNA microsatellites have altered the landscape. Crit. Rev. Plant Sci. 29: 148-161. http://dx.doi.org/10.1080/07352689.2010.481167   Carvalho D and Oliveira AF (2004). Genetic structure of Copaifera langsdorffii Desf. natural populations. Cerne 10: 137-153.   Ciampi AY, Brondani RPV and Grattapaglia D (2000). Otimização de Sistemas Fluorescentes de Genotipagem Multiloco e Desenvolvimento de Marcadores Microssatélites para Copaifera langsdorffii Desf. (Copaíba) Leguminosae- Caesalpinoideae. Embrapa Recursos Genéticos e Biotecnologia, Brasília, 40.   Cockerham CC (1969). Variance of gene frequencies. Evolution 23: 72-84. http://dx.doi.org/10.2307/2406485   Doligez A and Joly H (1997). Mating system of Carapa procera (Meliaceae) in the french guiana tropical forest. Am. J. Bot. 84: 461. http://dx.doi.org/10.2307/2446022 PMid:21708599   FAO's report (2001). Global forest resources assessment, tropical South America. FAO Forestry Paper 140: 287-291.   FAO (2011). Recursos Genéticos Forestales. Available at [http://www.fao.org/forestry/fgr/es/]. Accessed September 10, 2011.   Feres JM, Guidugli MC, Mestriner MA, Sebbenn AM, et al. (2009). Microsatellite diversity and effective population size in a germplasm bank of Hymenaea courbaril L. var stilbocarpa (Leguminosae), an endangered tropical tree:recommendations for conservation. Genet. Resour. Crop Evol. 56: 797-807. http://dx.doi.org/10.1007/s10722-008-9402-2   Feres JM, Sebbenn AM, Guidugli MC, Mestriner MA, et al. (2012). Mating system parameters at hierarchical levels of fruits, individuals and populations in the Brazilian insect-pollinated tropical tree, Tabebuia roseo-alba (Bignoniaceae). Conserv. Genet. 13: 393-405. http://dx.doi.org/10.1007/s10592-011-0292-z   Ferreira-Ramos R, Laborda PR, Santos MO, Mayor MS, et al. (2008). Genetic analyses of forest species Eugenia uniflora L. through of newly developed SSR markers. Conserv. Genet. 9: 1281-1285. http://dx.doi.org/10.1007/s10592-007-9458-0   Freitas CV and Oliveira PE (2002). Reproductive biology of Copaifera langsdorffii Desf. (Leguminosae, Caesalpinioideae). Rev. Bras. Bot. 25: 311-321. http://dx.doi.org/10.1590/S0100-84042002000300007   Graudal L, Kjaer E, Thomsen A and Larsen AB (1997). Planning national programmes for conservation of forest genetic resources. Danida Forest Seed Centre, Humlebaek, Denmark Technical Note No. 48. Available at [http://curis.ku.dk/portal-life/files/20710949/tn48.pdf]. Accessed January 30, 2013.   Guidugli MC, Ferreira-Ramos R, de Sousa AC, Cidade FW, et al. (2012). Genetic diversity of Metrodorea nigra (Rutaceae) from a small forest remnant in Brazil assessed with microsatellite markers. Genet. Mol. Res. 11: 10-16. http://dx.doi.org/10.4238/2012.January.9.2 PMid:22290461   Hufford KM and Hamrick JL (2003). Viability selection at three early life stages of the tropical tree, Platypodium elegans (Fabaceae, Papilionoideae). Evolution 57: 518-526. PMid:12703941   Kotchetkoff-Henriques O (2003). Characterization of the Natural Vegetation in Ribeirão Preto, SP: Bases for Conservation. DSc thesis, Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto, Universidade de São Paulo, Ribeirão Preto. Available at [http://www.bv.fapesp.br/pt/dissertacoes-teses/6724/caracterizacao-vegetacao-natural-ribeirao-preto/]. Accessed January 30, 2013.   Leite AMC and Lleras E (1993). Priority areas for genetic resources of native forest species: preliminary phase. Acta Bot. Bras. 7: 61-94.   Lewis PO and Zaykin D (2002). GDA - Genetic Data Analysis: Version 1.1 for Windows 95/NT. Available at [http://hydrodictyon.eeb.uconn.edu/people/plewis/software.php]. Accessed January 30, 2013.   Lobo JA, Quesada M and Stoner KE (2005). Effects of pollination by bats on the mating system of Ceiba pentandra (Bombacaceae) populations in two tropical life zones in Costa Rica. Am. J. Bot. 92: 370-376. http://dx.doi.org/10.3732/ajb.92.2.370 PMid:21652412   Martins K, Santos JD, Santos JD, Moreno MA, et al. (2008). Estrutura genética populacional de Copaifera langsdorffii Desf. (Leguminosae - Caesalpinioideae) em fragmentos florestais no Pontal do Paranapanema, SP, Brasil. Rev. Bras. Bot. 31: 61-69. http://dx.doi.org/10.1590/S0100-84042008000100007   Moraes MLT, Kageyama PY and Sebbenn AM (2004). Correlated mating in dioecious tropical tree species, Myracrodruon urundeuva Fr. All. Forest Genet. 11: 53-59.   Motta Junior JC and Lombardi JA (1990). Aves como agentes dispersores da copaíba (Copaifera langsdorffii, Caesalpiniaceae) em São Carlos, estado de São Paulo. Ararajuba 1: 105-106.   Myers N, Mittermeier RA, Mittermeier CG, Fonseca GAB, et al. (2000). Biodiversity hotspots for conservation priorities. Nature 403: 853-858. http://dx.doi.org/10.1038/35002501 PMid:10706275   Obayashi K, Tsumara Y, Ihara-Unino T, Niyama K, et al. (2002). Genetic diversity and outcrossing rate between undisturbed and selective logged forest of Shorea curtissi using microsatellite DNA analysis. Int. J. Plant. Sci. 163: 151-158. http://dx.doi.org/10.1086/324549   Oliveira AF, Carvalho DES and Rosado CS (2002). Outcrossing rate and mating system of a natural population of Copaifera langsdorffii Desf. in the region of Lavras, MG, starting from isozyme. Rev. Bras. Bot. 25: 331-338. http://dx.doi.org/10.1590/S0100-84042002000300009   Pedroni F, Sanchez M and Santos FAM (2002). Phenology of copaíba (Copaifera langsdorffii Desf. Leguminosae, Caesalpinioideae - in a semideciduous forest, southeastern Brazil. Rev. Bras. Bot. 25: 183-194. http://dx.doi.org/10.1590/S0100-84042002000200007   Pinto SIC, Souza AM and Carvalho D (2004). Variabilidade genética por isoenzimas em populações de Copaifera langsdorffii Desf. em dois fragmentos de mata ciliar. Sci. Forest. 65: 40-48.   Reis AMM and Grattapaglia D (2004). RAPD variation in a germoplasm collection of Myracrodruon urundeuva (Anacardiaceae), an endangered tropical tree: Recommendations for conservation. Genet. Resour. Crop Evol. 51:529-538. http://dx.doi.org/10.1023/B:GRES.0000024159.48644.e6   Ribeiro RA and Lovato MB (2004). Mating system in a neotropical tree species, Senna multijuga (Fabaceae). Genet. Mol. Biol. 27: 418-424. http://dx.doi.org/10.1590/S1415-47572004000300018   Ritland K (1989). Correlated matings in the partial selfer Mimulus guttatus. Evolution 43: 848-859. http://dx.doi.org/10.2307/2409312   Ritland K (2002). Estimation of gene frequency and heterozygosity from pooled samples. Mol. Ecol. Notes 2: 370-372. http://dx.doi.org/10.1046/j.1471-8286.2002.00182.x   Ritland K and Jain S (1981). A model for the estimation of outcrossing rate and gene frequencies using n independent loci. Heredity 47: 35-52. http://dx.doi.org/10.1038/hdy.1981.57   Rocha OJ and Aguilar G (2001). Variation in the breeding behavior of the dry forest tree Enterolobium cyclocarpum (guanacaste) in Costa Rica. Am. J. Bot. 88: 1600-1606. http://dx.doi.org/10.2307/3558404 PMid:21669693   Sampson JF (1998). Multiple paternity in Eucalyptus rameliana (Myrtaceae). Heredity 81: 349-355. http://dx.doi.org/10.1046/j.1365-2540.1998.00404.x   Sebbenn AM (2006). Sistema de Reprodução em Espécies Arbóreas Tropicais e suas Implicações para a Seleção de Árvores Matrizes para Reflorestamentos Ambientais (Higa AH and Silva L, eds.). Pomar de Sementes de Espécies Florestais Nativas. FUPEF, Curitiba.   Sebbenn AM, Carvalho AC, Freitas ML, Moraes SM, et al. (2011). Low levels of realized seed and pollen gene flow and strong spatial genetic structure in a small, isolated and fragmented population of the tropical tree Copaifera langsdorffii Desf. Heredity 106: 134-145. http://dx.doi.org/10.1038/hdy.2010.33 PMid:20372183 PMCid:3183851   Tilman D, May RM, Lehman CL and Nowak MA (1994). Habitat destruction and the extinction debt. Nature 371: 65-66. http://dx.doi.org/10.1038/371065a0   Weir BS (1996). Genetic Data Analysis II: Methods for Discrete Population Genetic Data. Sinauer Associates, Sunderland.   Weir BS and Cockerham CC (1984). Estimating F-statistics for the analysis of population-structure. Evolution 38: 1358- 1370. http://dx.doi.org/10.2307/2408641   Zorzetto R, Fioravanti C and Ferroni MA (2003). The forest is reborn. Pesq. FAPESP 91: 48-52.
E. V. Tambarussi, Vencovsky, R., Freitas, M. L. M., and Sebbenn, A. M., Mendelian inheritance, genetic linkage, and genotypic disequilibrium at nine microsatellite loci of Cariniana legalis (Mart.) O. Kuntze, vol. 12, pp. 5442-5457, 2013.
2012
T. M. Moura, Martins, K., Sujii, P. S., Sebbenn, A. M., and Chaves, L. J., Genetic structure in fragmented populations of Solanum lycocarpum A. St.-Hil. with distinct anthropogenic histories in a Cerrado region of Brazil, vol. 11, pp. 2674-2682, 2012.
Aguiar LMS, Machado RB and Marinho-Filho JA (2004). Diversidade Biológica do Cerrado. In: Cerrado: Ecologia e Caracterização (Aguiar LMS and Camargo AJA, eds.). EMBRAPA Cerrados, Planaltina, 17-40.   Boyle TJ (2000). Criteria and Indicators for the Conservation of Genetic Diversity. In: Forest Conservation Genetics: Principles and Practice (Young A, Boshier D and Boyle T, eds.). CSIRO Publishing, Collingwood, 239-251.   Cockerham CC and Weir BS (1993). Estimation of gene flow from F-statistics. Evolution 47: 855-863. http://dx.doi.org/10.2307/2410189   Collevatti RG, Grattapaglia D and Hay JD (2001). Population genetic structure of the endangered tropical tree species Caryocar brasiliense, based on variability at microsatellite loci. Mol. Ecol. 10: 349-356. http://dx.doi.org/10.1046/j.1365-294x.2001.01226.x PMid:11298950   Collevatti RG, Grattapaglia D and Hay JD (2003). Evidences for multiple maternal lineages of Caryocar brasiliense populations in the Brazilian Cerrado based on the analysis of chloroplast DNA sequences and microsatellite haplotype variation. Mol. Ecol. 12: 105-115. http://dx.doi.org/10.1046/j.1365-294X.2003.01701.x PMid:12492881   Collevatti RG, Estolano R, Garcia SF and Hay JD (2010). Short-distance pollen dispersal and high self-pollination in a bat-pollinated neotropical tree. Tree Genet. Genomes 6: 555-564. http://dx.doi.org/10.1007/s11295-010-0271-4   Courtenay O (1994). Conservation of the maned wolf: fruitful relationships in a changing environment. Canid News 2: 41-43.   Degen B (2006). GDA_NT 2006. Genetic Data Analysis and Numerical Tests. Institute for Forest Genetics, Grosshansdorf.   Doyle JJ and Doyle JL (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19: 11-15.   Evanno G, Regnaut S and Goudet J (2005). Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol. Ecol. 14: 2611-2620. http://dx.doi.org/10.1111/j.1365-294X.2005.02553.x PMid:15969739   Goudet J (1995). FSTAT (version 1.2): a computer program to calculate F-statistics. J. Hered. 86: 485-486.   Goudet J, Raymond M, de MT and Rousset F (1996). Testing differentiation in diploid populations. Genetics 144: 1933- 1940. PMid:8978076 PMCid:1207740   Hedrick PW (2005). A standardized genetic differentiation measure. Evolution 59: 1633-1638. PMid:16329237   Lombardi JA and Motta JC Jr (1993). Seed dispersal of Solanum lycocarpum St.Hil. (Solanaceae) by the maned wolf, Chrysocyon brachyurus Illiger (Mammalia, Canidae). Cienc. Cult. 45: 126-127.   Machado RB, Ramos Neto MB, Pereira PGP, Caldas EF, et al (2004). Estimativas de Perda da Área do Cerrado Brasileiro. Relatório Técnico. Conservation International, Brasília.   Mantel N (1967). The detection of disease clustering and a generalized regression approach. Cancer Res. 27: 209-220. PMid:6018555   Martins K, Chaves LJ, Buso GSC and Kageyama PY (2006). Mating system and fine-scale spatial genetic structure of Solanum lycocarpum St.Hil. (Solanaceae) in Brazilian Cerrado. Conserv. Genet. 7: 957-969. http://dx.doi.org/10.1007/s10592-006-9140-y   Martins K, Chaves LJ, Vencovsky R and Kageyama PY (2011). Genetic structure based on nuclear and chloroplast microsatellite loci of Solanum lycocarpum A. St.-Hil. (Solanaceae) in Central Brazil. Genet. Mol. Res. 10: 665-677. http://dx.doi.org/10.4238/vol10-2gmr1046 PMid:21523656   Moraes MLT and Sebbenn AM (2011). Pollen dispersal between isolated trees in the Brazilian Savannah: a case study of the neotropical tree Hymenaea stigonocarpa. Biotropica 43: 192-199. http://dx.doi.org/10.1111/j.1744-7429.2010.00679.x   Moreno MA, Tarazi R, Ferraz EM, Gandara FB, et al. (2009). Estrutura genética espacial em populações de Hymenaea stigonacarpa Mart. ex Hayne mediante a utilização de marcadores microssatélites cloroplastitidais. Sci. For. 37: 513-523.   Moura TM, Sebbenn AM, Chaves LJ, Coelho ASG, et al. (2009). Diversidade e estrutura genética espacial em populações fragmentadas de Solanum spp. do cerrado, estimadas por meio de locos microssatélites. Sci. For. 37: 143-150.   Moura TM, Oliveira GCX and Chaves LJ (2010). Correlation between flowering, fructification and environmental variables in Solanum lycocarpum A. St.-Hil, Solanaceae. Biosci. J. 26: 457-462.   Moura TM, Sebbenn AM, Martins K, Moreno MA, et al. (2011). Allelic diversity in populations of Solanum lycocarpum A. St.-Hil (Solanaceae) in a protected area and a disturbed environment. Acta Bot. Bras. 25: 937-940. http://dx.doi.org/10.1590/S0102-33062011000400023   Myers N, Mittermeier RA, Mittermeier CG, Fonseca GAB, et al. (2000). Biodiversity hotspots for conservation priorities. Nature 403: 853-858. http://dx.doi.org/10.1038/35002501 PMid:10706275   Namkoong G, Boyle TJB, El-Kassaby YA, Palmberg-Lerche C, et al (2002). Criteria and Indicators for Sustainability Forest Management: Assessment and Monitoring of Genetic Variation. Food and Agricutural Organization, Rome. PMCid:3054900   Oliveira-Filho AT and Oliveira LCA (1988). Biologia floral de uma população de Solanum lycocarpum St.-Hil. (Solanaceae) em Lavras, MG. Rev. Bras. Bot. 11: 23-32.   Petit RJ, El Mousadik A and Pons O (1998). Identifying populations for conservation on the basis of genetic markers. Conserv. Biol. 12: 844-855. http://dx.doi.org/10.1046/j.1523-1739.1998.96489.x   Pritchard JK, Stephens M and Donnelly P (2000). Inference of population structure using multilocus genotype data. Genetics 155: 945-959. PMid:10835412 PMCid:1461096   Rohlf FJ (1989). NTSYS-pc: Numerical Taxonomy and Multivariate Analysis System. Exeter publisher, New York.   Silva JMC and Bates JM (2002). Biogeographic patterns and conservation in the South American Cerrado: a tropical savanna hotspot. BioScience 52: 225-234. http://dx.doi.org/10.1641/0006-3568(2002)052[0225:BPACIT]2.0.CO;2   Slatkin M (1993). Isolation by distance in equilibrium and non-equilibrium populations. Evolution 47: 264-279. http://dx.doi.org/10.2307/2410134   Soares TN, Chaves LJ, de Campos Telles MP, Diniz-Filho JA, et al. (2008). Landscape conservation genetics of Dipteryx alata ("baru" tree: Fabaceae) from Cerrado region of central Brazil. Genetica 132: 9-19. http://dx.doi.org/10.1007/s10709-007-9144-7 PMid:17333479   Strand AE, Milligan BG and Pruitt CM (1996). Are populations islands? Analysis of chloroplast DNA variation in Aquilegia. Evolution 50: 1822-1829. http://dx.doi.org/10.2307/2410739   Tarazi R, Moreno MA, Gandara FB, Ferraz EM, et al. (2010). High levels of genetic differentiation and selfing in the Brazilian cerrado fruit tree Dipteryx alata Vog. (Fabaceae). Genet. Mol. Biol. 33: 78-85. http://dx.doi.org/10.1590/S1415-47572010005000007 PMid:21637609 PMCid:3036066   Telles MPC, Valva FD, Bandeira LF and Coelho ASG (2003). Caracterização genética de populações naturais de araticunzeiro (Annona crassiflora Mart. - Annonaceae) no Estado de Goiás. Rev. Bras. Bot. 26: 123-129. http://dx.doi.org/10.1590/S0100-84042003000100013   Telles MPC, Silva SP, Ramos JR, Soares TN, et al. (2010). Estrutura genética em populações naturais de Tibouchina papyrus em áreas de campo rupestre no cerrado. Rev. Bras. Bot. 33: 291-300. http://dx.doi.org/10.1590/S0100-84042010000200010   Weir BS (1996). Genetic Data Analysis II. Sinauer Associates, Sunderland.   Weir BS and Cockerham CC (1984). Estimating F-statistics for the analysis of population structure. Evolution 38: 1358- 1370. http://dx.doi.org/10.2307/2408641   Wright S (1951). The genetical structure of populations. Ann. Eugenics 15: 323-354.   Zucchi MI, Brondani RPV, Pinheiro JB, Chaves LJ, et al. (2003). Genetic structure and gene flow in Eugenia dysenterica DC. in the Brazilian Cerrado utilizing SSR markers. Genet. Mol. Biol. 26: 449-457. http://dx.doi.org/10.1590/S1415-47572003000400008
F. S. Carneiro, Lacerda, A. E. B., Lemes, M. R., Gribel, R., Kanashiro, M., and Sebbenn, A. M., Mendelian inheritance, linkage and genotypic disequilibrium in microsatellite loci isolated from Hymenaea courbaril (Leguminosae), vol. 11. pp. 1942-1948, 2012.
 Carneiro FS, Lacerda AEB, Lemes MR and Gribel R (2011). Effects of selective logging on the mating system and pollen dispersal of Hymenaea courbaril L. (Leguminosae) in the Eastern Brazilian Amazon as revealed by microsatellite analysis. Forest Ecol. Manag. 262: 1758-1765.http://dx.doi.org/10.1016/j.foreco.2011.07.023 Ciampi AY, Gaiotto F and Saganuma E (2000). Desenvolvimento e caracterização de marcadores microssatélites para Hymenaea courbaril. Genet. Mol. Biol. 23: 216. Doyle JJ and Doyle JL (1987). Isolation of plant DNA from fresh tissue. Focus 12: 13-15. Dunphy BK, Hamrick JL and Schwagerl J (2004). A comparison of direct and indirect measures of gene flow in the bat-pollinated tree Hymenaea courbaril in the dry forest life zone of south-western Puerto Rico. Inter. J. Plant Sci. 165: 427-436.http://dx.doi.org/10.1086/382802 Gillet E and Hattemer HH (1989). Genetic analysis of isoenzyme phenotypes using single tree progenies. Heredity 63: 135-141.http://dx.doi.org/10.1038/hdy.1989.84 Goudet J (1995). FSTAT (Version 1.2): A computer program to calculate F-statistics. J. Hered. 86: 485-486. Lacerda AEB, Kanashiro M and Sebbenn AM (2008a). Effects of selective logging on genetic diversity and spatial genetic structure of a Hymenaea courbaril population in the Brazilian Amazon Forest. Forest Ecol. Manag. 255: 1034-1043.http://dx.doi.org/10.1016/j.foreco.2007.10.009 Lacerda AEB, Kanashiro M and Sebbenn AM (2008b). Long-pollen movement and deviation of random mating in a low-density continuous population of a tropical tree Hymenaea courbaril in the Brazilian Amazon. Biotropica 40: 462-470.http://dx.doi.org/10.1111/j.1744-7429.2008.00402.x Sebbenn AM, Degen B, Azevedo VCR, Silva MB, et al. (2008). Modelling the long term impact of selective logging on genetic diversity and demographic structure of four tropical tree species in the Amazon forest. Forest Ecol. Manag. 254: 335-349.http://dx.doi.org/10.1016/j.foreco.2007.08.009