Publications
Found 9 results
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“Effect of organic matter enrichment on the fungal community in limestone cave sediments”, vol. 15, p. -, 2016.
, “Effect of organic matter enrichment on the fungal community in limestone cave sediments”, vol. 15, p. -, 2016.
, , , “DGGE and multivariate analysis of a yeast community in spontaneous cocoa fermentation process”, vol. 14, pp. 18465-18470, 2015.
, “Elucidation of bacterial community structure on thin-spined porcupine (Chaetomys subspinosus) spines by denaturing”, vol. 14. pp. 11867-11875, 2015.
, , ,
“Detection by denaturing gradient gel electrophoresis of ammonia-oxidizing bacteria in microcosms of crude oil-contaminated mangrove sediments”, vol. 11, pp. 190-201, 2012.
, Amorim JH, Macena TN, Lacerda GV Jr, Rezende RP, et al. (2008). An improved extraction protocol for metagenomic DNA from a soil of the Brazilian Atlantic Rainforest. Genet. Mol. Res. 7: 1226-1232.
http://dx.doi.org/10.4238/vol7-4gmr509
PMid:19065757
Arp DJ, Yeager CM and Hyman MR (2001). Molecular and cellular fundamentals of aerobic cometabolism of trichloroethylene. Biodegradation 12: 81-103.
http://dx.doi.org/10.1023/A:1012089908518
PMid:11710592
Atlas RM (1995). Biorremediation of Petroleum Pollutants. University of Louisville, Lousville.
Bartha R and Pramer D (1965). Features of a flask and method for measuring the persistence and biological effects of pesticides in soil. Soil Sci. 100: 68-70.
http://dx.doi.org/10.1097/00010694-196507000-00011
Bock E, Koops HP, Harms H and Ahlers B (1991). The Biochemistry of Nitrifying Organisms. In: Variations in Autotrophic Life (Shively JM and Barton LL, eds.). Academic Press, San Diego, 171-200.
Bordenave S, Goni-Urriza MS, Caumette P and Duran R (2007). Effects of heavy fuel oil on the bacterial community structure of a pristine microbial mat. Appl. Environ. Microbiol. 73: 6089-6097.
http://dx.doi.org/10.1128/AEM.01352-07
PMid:17704271 PMCid:2075027
Bothe H, Jost G, Schloter M, Ward BB, et al. (2000). Molecular analysis of ammonia oxidation and denitrification in natural environments. FEMS Microbiol. Rev. 24: 673-690.
http://dx.doi.org/10.1111/j.1574-6976.2000.tb00566.x
PMid:11077158
Brazil (1965). Federal Law No. 4.771, of September 15, 1965. Brasília, 1965. Available at [http://www.lei.adv.br]. Accessed October 7, 2011.
Burton SA and Prosser JI (2001). Autotrophic ammonia oxidation at low pH through urea hydrolysis. Appl. Environ. Microbiol. 67: 2952-2957.
http://dx.doi.org/10.1128/AEM.67.7.2952-2957.2001
PMid:11425707 PMCid:92966
CONAMA (1985). Conselho Nacional do Meio Ambiente. Resolution nº 04/1985, of September 18, 1985. Available at [http://www.mma.gov.br/port/conama/res/res85/res0485.html]. Accessed October 07, 2011.
Evans FF, Rosado AS, Sebastian GV, Casella R, et al. (2004). Impact of oil contamination and biostimulation on the diversity of indigenous bacterial communities in soil microcosms. FEMS Microbiol. Ecol. 49: 295-305.
http://dx.doi.org/10.1016/j.femsec.2004.04.007
Gieseke A, Tarre S, Green M and de Beer D (2006). Nitrification in a biofilm at low pH values: role of in situ microenvironments and acid tolerance. Appl. Environ. Microbiol. 72: 4283-4292.
http://dx.doi.org/10.1128/AEM.00241-06
PMid:16751543 PMCid:1489657
Harayama S, Kasai Y and Hara A (2004). Microbial communities in oil-contaminated seawater. Curr. Opin. Biotechnol. 15: 205-214.
http://dx.doi.org/10.1016/j.copbio.2004.04.002
PMid:15193328
Heuer H, Krsek M, Baker P, Smalla K, et al. (1997). Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients. Appl. Environ. Microbiol. 63: 3233-3241.
PMid:9251210 PMCid:168621
Hollocher TC, Tate ME and Nicholas DJ (1981). Oxidation of ammonia by Nitrosomonas europaea. Definite 18O-tracer evidence that hydroxylamine formation involves a monooxygenase. J. Biol. Chem. 256: 10834-10836.
PMid:7287737
Islam KR and Weil RR (2000). Soil quality indicator properties in mid-Atlantic soils as influenced by conservation management. J. Soil Water Conserv. 55: 69-78.
Jia Z and Conrad R (2009). Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil. Environ. Microbiol. 11: 1658-1671.
http://dx.doi.org/10.1111/j.1462-2920.2009.01891.x
PMid:19236445
Junier P, Kim OS, Junier T, Ahn TS, et al. (2009). Community analysis of betaproteobacterial ammonia-oxidizing bacteria using the amoCAB operon. Appl. Microbiol. Biotechnol. 83: 175-188.
http://dx.doi.org/10.1007/s00253-009-1923-x
PMid:19274459 PMCid:2845890
Karlen DL, Andrews SS and Doran JW (2001). Soil quality: Current concepts and applications. Adv. Agron. 74: 1-40.
http://dx.doi.org/10.1016/S0065-2113(01)74029-1
Kasai Y, Kishira H, Syutsubo K and Harayama S (2001). Molecular detection of marine bacterial populations on beaches contaminated by the Nakhodka tanker oil-spill accident. Environ. Microbiol. 3: 246-255.
http://dx.doi.org/10.1046/j.1462-2920.2001.00185.x
PMid:11359510
Kathiresan K and Bingham BL (2001). Biology of mangroves and mangrove ecosystems. Adv. Mar. Biol. 40: 81-251.
http://dx.doi.org/10.1016/S0065-2881(01)40003-4
Koops H-P, Purkhold U, Pommerening-Röser A, Timmermann G, et al. (2006). The Lithoautotrophic Ammonia-Oxidizing Bacteria. In: The Prokaryotes (Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, et al., eds.). Vol. 2. Springer, New York, 778-811.
http://dx.doi.org/10.1007/0-387-30745-1_36
Leahy JG and Colwell RR (1990). Microbial degradation of hydrocarbons in the environment. Microbiol. Rev. 54: 305- 315.
PMid:2215423 PMCid:372779
Maciel BM, Santos AC, Dias JC, Vidal RO, et al. (2009). Simple DNA extraction protocol for a 16S rDNA study of bacterial diversity in tropical landfarm soil used for bioremediation of oil waste. Genet. Mol. Res. 8: 375-388.
http://dx.doi.org/10.4238/vol8-1gmr559
PMid:19440973
McCaig AE, Embley TM and Prosser JI (1994). Molecular analysis of enrichment cultures of marine ammonia oxidisers. FEMS Microbiol. Lett. 120: 363-367.
http://dx.doi.org/10.1111/j.1574-6968.1994.tb07059.x
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Muyzer G, de Waal EC and Uitterlinden AG (1993). Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59: 695-700.
PMid:7683183 PMCid:202176
Nicol GW, Leininger S, Schleper C and Prosser JI (2008). The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria. Environ. Microbiol. 10: 2966-2978.
http://dx.doi.org/10.1111/j.1462-2920.2008.01701.x
PMid:18707610
Nicolaisen MH and Ramsing NB (2002). Denaturing gradient gel electrophoresis (DGGE) approaches to study the diversity of ammonia-oxidizing bacteria. J. Microbiol. Methods 50: 189-203.
http://dx.doi.org/10.1016/S0167-7012(02)00026-X
Prosser JI (1989). Autotrophic nitrification in bacteria. Adv. Microb. Physiol. 30: 125-181.
http://dx.doi.org/10.1016/S0065-2911(08)60112-5
Rotthauwe JH, Witzel KP and Liesack W (1997). The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations. Appl. Environ. Microbiol. 63: 4704-4712.
PMid:9406389 PMCid:168793
Sayavedra-Soto LA, Hommes NG, Alzerreca JJ, Arp DJ, et al. (1998). Transcription of the amoC, amoA and amoB genes in Nitrosomonas europaea and Nitrosospira sp. NpAV. FEMS Microbiol. Lett. 167: 81-88.
http://dx.doi.org/10.1111/j.1574-6968.1998.tb13211.x
PMid:9785456
Stephen JR, Kowalchuk GA, Bruns MAV, McCaig AE, et al. (1998). Analysis of beta-subgroup proteobacterial ammonia oxidizer populations in soil by denaturing gradient gel electrophoresis analysis and hierarchical phylogenetic probing. Appl. Environ. Microbiol. 64: 2958-2965.
PMid:9687457 PMCid:106799
Vanneli T and Hooper AB (1992). Oxidation of nitrapyrin to 6-chloropicolinic acid by the ammonia-oxidizing bacterium Nitrosomonas europaea. Appl. Environ. Microbiol. 58: 2321-2325.
PMid:16348740 PMCid:195775
Vannelli T, Logan M, Arciero D and Hooper AB (1990). Degradation of halogenated aliphatics by the ammonia-oxidizing bacterium Nitrosomonas europaea. Appl. Environ. Microbiol. 56: 1169-1171.
PMid:2339874 PMCid:184364
Zhang LM, Wang M, Prosser JI, Zheng YM, et al. (2009). Altitude ammonia-oxidizing bacteria and archaea in soils of Mount Everest. FEMS Microbiol. Ecol. 70: 52-61.
http://dx.doi.org/10.1111/j.1574-6941.2009.00775.x
PMid:19780828