Publications
Found 29 results
Filters: Author is W. Chen [Clear All Filters]
“Candidate genes expression affect intramuscular fat content and fatty acid composition in Tan sheep”, Genetics and Molecular Research, vol. 19, no. 4, 2020.
, “Characterization of RsMYB28 and RsMYB29 transcription factor genes in radish (Raphanus sativus L.)”, vol. 15, p. -, 2016.
, “Characterization of RsMYB28 and RsMYB29 transcription factor genes in radish (Raphanus sativus L.)”, vol. 15, p. -, 2016.
, “Characterization of the complete mitochondrial genome and phylogenetic relationships of the three-spot swimming crab (Portunus sanguinolentus)”, vol. 15, p. -, 2016.
, “Characterization of the complete mitochondrial genome and phylogenetic relationships of the three-spot swimming crab (Portunus sanguinolentus)”, vol. 15, p. -, 2016.
, “Characterization of the complete mitochondrial genome of Portunus pelagicus with implications for phylogenomics”, vol. 15, p. -, 2016.
, “Characterization of the complete mitochondrial genome of Portunus pelagicus with implications for phylogenomics”, vol. 15, p. -, 2016.
, “Data integration for identification of important transcription factors of STAT6-mediated cell fate decisions”, vol. 15, p. -, 2016.
, “Data integration for identification of important transcription factors of STAT6-mediated cell fate decisions”, vol. 15, p. -, 2016.
, “First genetic linkage map for the mud crab (Scylla paramamosain) constructed using microsatellite and AFLP markers”, vol. 15, p. -, 2016.
, “First genetic linkage map for the mud crab (Scylla paramamosain) constructed using microsatellite and AFLP markers”, vol. 15, p. -, 2016.
, “Genetic diversity and structure of native and non-native populations of the endangered plant Pinus dabeshanensis”, vol. 15, p. -, 2016.
, “Genetic diversity and structure of native and non-native populations of the endangered plant Pinus dabeshanensis”, vol. 15, p. -, 2016.
, “Optimization of selective breeding through analysis of morphological traits in Chinese sea bass (Lateolabrax maculatus)”, vol. 15, p. -, 2016.
, “Optimization of selective breeding through analysis of morphological traits in Chinese sea bass (Lateolabrax maculatus)”, vol. 15, p. -, 2016.
, “Preliminary study on total protein extraction methods from Enterococcus faecalis biofilm”, vol. 15, p. -, 2016.
, “Preliminary study on total protein extraction methods from Enterococcus faecalis biofilm”, vol. 15, p. -, 2016.
, “SSR-based association mapping of salt tolerance in cotton (Gossypium hirsutum L.)”, vol. 15, p. -, 2016.
, “SSR-based association mapping of salt tolerance in cotton (Gossypium hirsutum L.)”, vol. 15, p. -, 2016.
, “AMP-activated protein kinase regulates autophagic protection against cisplatin-induced tissue injury in the kidney”, vol. 14, pp. 12006-12015, 2015.
, “Analysis of ROP signaling in the leaf epidermis of mutant tomato with low-energy ion beam”, vol. 14, pp. 3807-3816, 2015.
, “Analysis of upland cotton (Gossypium hirsutum) response to Verticillium dahliae inoculation by transcriptome sequencing”, vol. 14, pp. 13120-13130, 2015.
, “Cloning of superoxide dismutase from post-harvest Hami melon and quantitative expression analysis before and after disease”, vol. 14, pp. 18229-18240, 2015.
, “Development of FQ-PCR method to determine the level of ADD1 expression in fatty and lean pigs”, vol. 14, pp. 13924-13931, 2015.
, , “Characterization of EST-derived and non-EST simple sequence repeats in an F1 hybrid population of Vitis vinifera L.”, vol. 13, pp. 2220-2230, 2014.
, “Effect of antagonistic yeast XL-1 on resistance-associated enzyme activities in postharvest cantaloupe”, vol. 13, pp. 6253-6258, 2014.
, “Gene expression profile and enrichment pathways in different stages of bladder cancer”, vol. 12, pp. 1479-1489, 2013.
, “Improved method for predicting protein fold patterns with ensemble classifiers”, vol. 11, pp. 174-181, 2012.
, Boisvert S, Marchand M, Laviolette F and Corbeil J (2008). HIV-1 coreceptor usage prediction without multiple alignments: an application of string kernels. Retrovirology 5: 110.
http://dx.doi.org/10.1186/1742-4690-5-110
PMid:19055831 PMCid:2637298
Breimin L (2001). Random forests. Machine Learn. 45: 5-32.
http://dx.doi.org/10.1023/A:1010933404324
Cai CZ, Han LY, Ji ZL, Chen X, et al. (2003). SVM-Prot: Web-based support vector machine software for functional classification of a protein from its primary sequence. Nucleic Acids Res. 31: 3692-3697.
http://dx.doi.org/10.1093/nar/gkg600
PMid:12824396 PMCid:169006
Call ME, Schnell JR, Xu C, Lutz RA, et al. (2006). The structure of the zetazeta transmembrane dimer reveals features essential for its assembly with the T cell receptor. Cell 127: 355-368.
http://dx.doi.org/10.1016/j.cell.2006.08.044
PMid:17055436
Chen K and Kurgan L (2007). PFRES: protein fold classification by using evolutionary information and predicted secondary structure. Bioinformatics 23: 2843-2850.
http://dx.doi.org/10.1093/bioinformatics/btm475
PMid:17942446
Chou KC (2004). Structural bioinformatics and its impact to biomedical science. Curr. Med. Chem. 11: 2105-2134.
PMid:15279552
Ding CHQ and Dubchak I (2001). Multi-class protein fold recognition using support vector machines and neural networks. Bioinformatics 17: 349-358.
http://dx.doi.org/10.1093/bioinformatics/17.4.349
PMid:11301304
Douglas SM, Chou JJ and Shih WM (2007). DNA-nanotube-induced alignment of membrane proteins for NMR structure determination. Proc. Natl. Acad. Sci. U. S. A. 104: 6644-6648.
http://dx.doi.org/10.1073/pnas.0700930104
PMid:17404217 PMCid:1871839
Gao WN, Wei DQ, Li Y, Gao H, et al. (2007). Agaritine and its derivatives are potential inhibitors against HIV proteases. Med. Chem. 3: 221-226.
http://dx.doi.org/10.2174/157340607780620644
PMid:17504192
Honda M, Kawai H, Shirota Y, Yamashita T, et al. (2005). cDNA microarray analysis of autoimmune hepatitis, primary biliary cirrhosis and consecutive disease manifestation. J. Autoimmun. 25: 133-140.
http://dx.doi.org/10.1016/j.jaut.2005.03.009
PMid:16150573
Li Y, Wei DQ, Gao WN, Gao H, et al. (2007). Computational approach to drug design for oxazolidinones as antibacterial agents. Med. Chem. 3: 576-582.
http://dx.doi.org/10.2174/157340607782360362
PMid:18045208
Murzin AG, Brenner SE, Hubbard T and Chothia C (1995). SCOP: a structural classification of proteins database for the investigation of sequences and structures. J. Mol. Biol. 247: 536-540.
http://dx.doi.org/10.1016/S0022-2836(05)80134-2
Nanni L (2006). A novel ensemble of classifiers for protein fold recognition. Neurocomputing 69: 2434-2437.
http://dx.doi.org/10.1016/j.neucom.2006.01.026
Niels L, Mark H and Eibe F (2005). Logistic model trees. Machine Learn 95: 161-205.
Pu X, Guo J, Leung H and Lin Y (2007). Prediction of membrane protein types from sequences and position-specific scoring matrices. J. Theor. Biol. 247: 259-265.
http://dx.doi.org/10.1016/j.jtbi.2007.01.016
PMid:17433369
Schaffer AA, Aravind L, Madden TL, Shavirin S, et al. (2001). Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements. Nucleic Acids Res. 29: 2994-3005.
http://dx.doi.org/10.1093/nar/29.14.2994
PMid:11452024 PMCid:55814
Schnell JR and Chou JJ (2008). Structure and mechanism of the M2 proton channel of influenza A virus. Nature 451: 591-595.
http://dx.doi.org/10.1038/nature06531
PMid:18235503 PMCid:3108054
Shen HB and Chou KC (2006). Ensemble classifier for protein fold pattern recognition. Bioinformatics 22: 1717-1722.
http://dx.doi.org/10.1093/bioinformatics/btl170
PMid:16672258
Shen HB and Chou KC (2009). Predicting protein fold pattern with functional domain and sequential evolution information. J. Theor. Biol. 256: 441-446.
http://dx.doi.org/10.1016/j.jtbi.2008.10.007
PMid:18996396
Sumner M, Frank E and Hall MA (2005). Speeding up Logistic Model Tree Induction. In: Proceedings of 9th European Conference on Principles and Practice of Knowledge Discovery in Databases, Porto, Portugal (Jorge A, ed.). Springer, Germany, 675-683.
Vendruscolo M and Dobson CM (2005). A glimpse at the organization of the protein universe. PNAS 102: 5641-5642.
http://dx.doi.org/10.1073/pnas.0500274102
PMid:15827120 PMCid:556289