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“Cloning of flanking sequence in transgenic plants by restriction site-anchored single-primer polymerase chain reaction”, vol. 13, pp. 10556-10561, 2014.
, “DNA methylation involved in proline accumulation in response to osmotic stress in rice (Oryza sativa)”, vol. 12, pp. 1269-1277, 2013.
, Boyko A, Kathiria P, Zemp FJ, Yao Y, et al. (2007). Transgenerational changes in the genome stability and methylation in pathogen-infected plants: (virus-induced plant genome instability). Nucleic Acids Res. 35: 1714-1725.
http://dx.doi.org/10.1093/nar/gkm029
PMid:17311811 PMCid:1865051
Chan SW, Henderson IR and Jacobsen SE (2005). Gardening the genome: DNA methylation in Arabidopsis thaliana. Nat. Rev. Genet. 6: 351-360.
http://dx.doi.org/10.1038/nrg1601
PMid:15861207
Chinnusamy V and Zhu JK (2009). Epigenetic regulation of stress responses in plants. Curr. Opin. Plant Biol. 12: 133-139.
http://dx.doi.org/10.1016/j.pbi.2008.12.006
PMid:19179104 PMCid:3139470
Delauney AJ and Verma DPS (1993). Proline biosynthesis and osmoregulation in plants. Plant J. 4: 215-223.
http://dx.doi.org/10.1046/j.1365-313X.1993.04020215.x
Dong ZY, Wang YM, Zhang ZJ, Shen Y, et al. (2006). Extent and pattern of DNA methylation alteration in rice lines derived from introgressive hybridization of rice and Zizania latifolia Griseb. Theor. Appl. Genet. 113: 196-205.
http://dx.doi.org/10.1007/s00122-006-0286-2
PMid:16791687
Hare P and Cress W (1997). Metabolic implications of stress-induced proline accumulation in plants. Plant Growth Regul. 21: 79-102.
http://dx.doi.org/10.1023/A:1005703923347
Hu CA, Delauney AJ and Verma DP (1992). A bifunctional enzyme (delta 1-pyrroline-5-carboxylate synthetase) catalyzes the first two steps in proline biosynthesis in plants. Proc. Natl. Acad. Sci. U. S. A. 89: 9354-9358.
http://dx.doi.org/10.1073/pnas.89.19.9354
PMid:1384052 PMCid:50125
Jain M, Nijhawan A, Tyagi AK and Khurana JP (2006). Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR. Biochem. Biophys. Res. Commun. 345: 646-651.
http://dx.doi.org/10.1016/j.bbrc.2006.04.140
PMid:16690022
Karan R, DeLeon T, Biradar H and Subudhi PK (2012). Salt stress induced variation in DNA methylation pattern and its influence on gene expression in contrasting rice genotypes. PLoS One 7: e40203.
http://dx.doi.org/10.1371/journal.pone.0040203
PMid:22761959 PMCid:3386172
Kiyosue T, Yoshiba Y, Yamaguchi-Shinozaki K and Shinozaki K (1996). A nuclear gene encoding mitochondrial proline dehydrogenase, an enzyme involved in proline metabolism, is upregulated by proline but downregulated by dehydration in Arabidopsis. Plant Cell 8: 1323-1335.
PMid:8776899 PMCid:161248
Livak KJ and Schmittgen TD (2001). Analysis of relative gene expression data using real-time quantitative PCR and the 2-DDCT method. Methods 25: 402-408.
http://dx.doi.org/10.1006/meth.2001.1262
PMid:11846609
Lutts S, Majerus V and Kinet JM (1999). NaCl effects on proline metabolism in rice (Oryza sativa) seedlings. Physiol. Plant. 105: 450-458.
http://dx.doi.org/10.1034/j.1399-3054.1999.105309.x
Mattioli R, Costantino P and Trovato M (2009). Proline accumulation in plants: not only stress. Plant Signal. Behav. 4: 1016-1018.
http://dx.doi.org/10.4161/psb.4.11.9797
PMid:20009553 PMCid:2819507
Molinier J, Ries G, Zipfel C and Hohn B (2006). Transgeneration memory of stress in plants. Nature 442: 1046-1049.
http://dx.doi.org/10.1038/nature05022
PMid:16892047
Nanjo T, Fujita M, Seki M, Kato T, et al. (2003). Toxicity of free proline revealed in an Arabidopsis T-DNA-tagged mutant deficient in proline dehydrogenase. Plant Cell Physiol. 44: 541-548.
http://dx.doi.org/10.1093/pcp/pcg066
PMid:12773641
Peng Z, Lu Q and Verma DP (1996). Reciprocal regulation of delta 1-pyrroline-5-carboxylate synthetase and proline dehydrogenase genes controls proline levels during and after osmotic stress in plants. Mol. Gen. Genet. 253: 334-341.
http://dx.doi.org/10.1007/PL00008600
PMid:9003320
Rangwala SH and Richards EJ (2004). The value-added genome: building and maintaining genomic cytosine methylation landscapes. Curr. Opin. Genet. Dev. 14: 686-691.
http://dx.doi.org/10.1016/j.gde.2004.09.009
PMid:15531165
Richards EJ (2006). Inherited epigenetic variation - revisiting soft inheritance. Nat. Rev. Genet. 7: 395-401.
http://dx.doi.org/10.1038/nrg1834
PMid:16534512
Roosens NH, Thu TT, Iskandar HM and Jacobs M (1998). Isolation of the ornithine-delta-aminotransferase cDNA and effect of salt stress on its expression in Arabidopsis thaliana. Plant Physiol. 117: 263-271.
http://dx.doi.org/10.1104/pp.117.1.263
PMid:9576796 PMCid:35011
Saradhi PP, Alia, Arora S and Prasad KV (1995). Proline accumulates in plants exposed to UV radiation and protects them against UV induced peroxidation. Biochem. Biophys. Res. Commun. 209: 1-5.
http://dx.doi.org/10.1006/bbrc.1995.1461
PMid:7726821
Siripornadulsil S, Traina S, Verma DP and Sayre RT (2002). Molecular mechanisms of proline-mediated tolerance to toxic heavy metals in transgenic microalgae. Plant Cell 14: 2837-2847.
http://dx.doi.org/10.1105/tpc.004853
PMid:12417705 PMCid:152731
Tariq M and Paszkowski J (2004). DNA and histone methylation in plants. Trends Genet. 20: 244-251.
http://dx.doi.org/10.1016/j.tig.2004.04.005
PMid:15145577
Verbruggen N and Hermans C (2008). Proline accumulation in plants: a review. Amino Acids 35: 753-759.
http://dx.doi.org/10.1007/s00726-008-0061-6
PMid:18379856
Verbruggen N, Hua XJ, May M and Van Montagu M (1996). Environmental and developmental signals modulate proline homeostasis: evidence for a negative transcriptional regulator. Proc. Natl. Acad. Sci. U. S. A. 93: 8787-8791.
http://dx.doi.org/10.1073/pnas.93.16.8787
PMid:8710950 PMCid:38752
Verslues PE and Sharma S (2010). Proline metabolism and its implications for plant-environment interaction. Arabidopsis Book 8: e0140.
PMid:22303265 PMCid:3244962
Zang A, Xu X, Neill S and Cai W (2010). Overexpression of OsRAN2 in rice and Arabidopsis renders transgenic plants hypersensitive to salinity and osmotic stress. J. Exp. Bot. 61: 777-789.
http://dx.doi.org/10.1093/jxb/erp341
PMid:20018899 PMCid:2814108