Publications
Found 4 results
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“Genetic variability in isolates of Chromobacterium violaceum from pulmonary secretion, water, and soil”, vol. 15, p. -, 2016.
, , , “Genetic diversity of Burkholderia (Proteobacteria) species from the Caatinga and Atlantic rainforest biomes in Bahia, Brazil”, vol. 12, pp. 655-664, 2013.
, Achouak W, Christen R, Barakat M, Martel MH, et al. (1999). Burkholderia caribensis sp. nov., an exopolysaccharide-producing bacterium isolated from vertisol microaggregates in Martinique. Int. J. Syst. Bacteriol. 49 Pt 2: 787-794.
http://dx.doi.org/10.1099/00207713-49-2-787
PMid:10319504
Altschul SF, Madden TL, Schaffer AA, Zhang J, et al. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402.
http://dx.doi.org/10.1093/nar/25.17.3389
PMid:9254694 PMCid:146917
Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, et al. (2011). GenBank. Nucleic Acids Res. 39: D32-D37.
http://dx.doi.org/10.1093/nar/gkq1079
PMid:21071399 PMCid:3013681
Bramer CO, Vandamme P, da Silva LF, Gomez JG, et al. (2001). Polyhydroxyalkanoate-accumulating bacterium isolated from soil of a sugar-cane plantation in Brazil. Int. J. Syst. Evol. Microbiol. 51: 1709-1713.
http://dx.doi.org/10.1099/00207713-51-5-1709
PMid:11594600
Chiarini L, Cescutti P, Drigo L, Impallomeni G, et al. (2004). Exopolysaccharides produced by Burkholderia cenocepacia recA lineages IIIA and IIIB. J. Cyst. Fibros. 3: 165-172.
http://dx.doi.org/10.1016/j.jcf.2004.04.004
PMid:15463903
Coenye T and Vandamme P (2003). Diversity and significance of Burkholderia species occupying diverse ecological niches. Environ. Microbiol. 5: 719-729.
http://dx.doi.org/10.1046/j.1462-2920.2003.00471.x
PMid:12919407
Coenye T, Goris J, Spilker T, Vandamme P, et al. (2002). Characterization of unusual bacteria isolated from respiratory secretions of cystic fibrosis patients and description of Inquilinus limosus gen. nov., sp. nov. J. Clin. Microbiol. 40: 2062-9.
http://dx.doi.org/10.1128/JCM.40.6.2062-2069.2002
PMid:12037065 PMCid:130740
Coenye T, Henry D, Speert DP and Vandamme P (2004). Burkholderia phenoliruptrix sp. nov., to accommodate the 2,4,5-trichlorophenoxyacetic acid and halophenol-degrading strain AC1100. Syst. Appl. Microbiol. 27: 623-627.
http://dx.doi.org/10.1078/0723202042369992
PMid:15612618
Cole JR, Wang Q, Cardenas E, Fish J, et al. (2009). The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res. 37: D141-D145.
http://dx.doi.org/10.1093/nar/gkn879
PMid:19004872 PMCid:2686447
Compant S, Nowak J, Coenye T, Clement C, et al. (2008). Diversity and occurrence of Burkholderia spp. in the natural environment. FEMS Microbiol. Rev. 32: 607-626.
http://dx.doi.org/10.1111/j.1574-6976.2008.00113.x
PMid:18422616
Dalmastri C, Fiore A, Alisi C, Bevivino A, et al. (2003). A rhizospheric Burkholderia cepacia complex population: genotypic and phenotypic diversity of Burkholderia cenocepacia and Burkholderia ambifaria. FEMS Microbiol. Ecol. 46: 179-187.
http://dx.doi.org/10.1016/S0168-6496(03)00211-3
Edwards K, Johnstone C and Thompson C (1991). A simple and rapid method for the preparation of plant genomic DNA for PCR analysis. Nucleic Acids Res. 19: 1349.
http://dx.doi.org/10.1093/nar/19.6.1349
PMid:2030957 PMCid:333874
Fred EB and Waksman SA (1928). Laboratory Manual of General Microbiology - With Special Reference to the Microorganisms of the Soil. McGraw-Hill Book Company, New York.
PMid:16559297 PMCid:374984
Garau G, Yates RJ, Deiana P and Howieson JG (2009). Novel strains of nodulating Burkholderia have a role in nitrogen fixation with papilionoid herbaceous legumes adapted to acid, infertile soils. Soil Biol. Biochem. 41: 125-134.
http://dx.doi.org/10.1016/j.soilbio.2008.10.011
Gyaneshwar P, Hirsch AM, Moulin L, Chen WM, et al. (2011). Legume-nodulating betaproteobacteria: diversity, host range, and future prospects. Mol. Plant Microbe Interact. 24: 1276-1288.
http://dx.doi.org/10.1094/MPMI-06-11-0172
PMid:21830951
Huang X and Madan A (1999). CAP3: A DNA sequence assembly program. Genome Res. 9: 868-877.
http://dx.doi.org/10.1101/gr.9.9.868
PMid:10508846 PMCid:310812
Kang JG, Shin SY, Kim MJ, Bajpai V, et al. (2004). Isolation and anti-fungal activities of 2-hydroxymethyl-chroman-4- one Produced by Burkholderia sp. MSSP. J. Antibiot. 57: 726-731.
http://dx.doi.org/10.7164/antibiotics.57.726
PMid:15712667
Lane DJ (1991). 16S/23S rRNA Sequencing. In: Nucleic acid Thecniques in Bacterial Systematics (Stackebrandt E and Goodfellow M, eds.). Wiley, New York, 115-175.
Li X, Quan CS and Fan SD (2007). Antifungal activity of a novel compound from Burkholderia cepacia against plant pathogenic fungi. Lett. Appl. Microbiol. 45: 508-514.
http://dx.doi.org/10.1111/j.1472-765X.2007.02221.x
PMid:17958556
Maeda Y, Shinohara H, Kiba A, Ohnishi K, et al. (2006). Phylogenetic study and multiplex PCR-based detection of Burkholderia plantarii, Burkholderia glumae and Burkholderia gladioli using gyrB and rpoD sequences. Int. J. Syst. Evol. Microbiol. 56: 1031-1038.
http://dx.doi.org/10.1099/ijs.0.64184-0
PMid:16627650
Marquez-Santacruz HA, Hernandez-Leon R, Orozco-Mosqueda MC, Velazquez-Sepulveda I, et al. (2010). Diversity of bacterial endophytes in roots of Mexican husk tomato plants (Physalis ixocarpa) and their detection in the rhizosphere. Genet. Mol. Res. 9: 2372-2380.
http://dx.doi.org/10.4238/vol9-4gmr921
PMid:21157706
Mehnaz S (2011). Plant Growth-Promoting Bacteria Associated with Sugarcane. In: Bacteria in Agrobiology: Crop Ecosystems (Maheshwari DK, ed.). Springer, Berlin, 165-187.
http://dx.doi.org/10.1007/978-3-642-18357-7_7
O'Sullivan LA and Mahenthiralingam E (2005). Biotechnological potential within the genus Burkholderia. Lett. Appl. Microbiol. 41: 8-11.
http://dx.doi.org/10.1111/j.1472-765X.2005.01758.x
PMid:15960745
Partida-Martinez LP, Groth I, Schmitt I, Richter W, et al. (2007). Burkholderia rhizoxinica sp. nov. and Burkholderia endofungorum sp. nov., bacterial endosymbionts of the plant-pathogenic fungus Rhizopus microsporus. Int. J. Syst. Evol. Microbiol. 57: 2583-2590.
http://dx.doi.org/10.1099/ijs.0.64660-0
PMid:17978222
Payne GW, Vandamme P, Morgan SH, Lipuma JJ, et al. (2005). Development of a recA gene-based identification approach for the entire Burkholderia genus. Appl. Environ. Microbiol. 71: 3917-3927.
http://dx.doi.org/10.1128/AEM.71.7.3917-3927.2005
PMid:16000805 PMCid:1169057
Procopio RE, Araujo WL, Maccheroni W, Jr. and Azevedo JL (2009). Characterization of an endophytic bacterial community associated with Eucalyptus spp. Genet. Mol. Res. 8: 1408-1422.
http://dx.doi.org/10.4238/vol8-4gmr691
PMid:19937585
Shaharoona B, Jamro GM, Zahir ZA, Arshad M, et al. (2007). Effectiveness of various Pseudomonas spp. and Burkholderia caryophylli containing ACC-deaminase for improving growth and yield of wheat (Triticum aestivum L.). J. Microbiol. Biotechnol. 17: 1300-1307.
PMid:18051598
Suarez-Moreno ZR, Caballero-Mellado J, Coutinho BG, Mendonca-Previato L, et al. (2012). Common features of environmental and potentially beneficial plant-associated Burkholderia. Microb. Ecol. 63: 249-266.
http://dx.doi.org/10.1007/s00248-011-9929-1
PMid:21850446
Sultan Z, Park K, Lee SY, Park JK, et al. (2008). Novel oxidized derivatives of antifungal pyrrolnitrin from the bacterium Burkholderia cepacia K87. J. Antibiot. 61: 420-425.
http://dx.doi.org/10.1038/ja.2008.58
PMid:18776654
Tamura K, Dudley J, Nei M and Kumar S (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599.
http://dx.doi.org/10.1093/molbev/msm092
PMid:17488738
Thompson JD, Gibson TJ and Higgins DG (2002). Multiple sequence alignment using ClustalW and ClustalX. Curr. Protoc. Bioinformatics Chapter 2: Unit.
Valverde A, Delvasto P, Peix A, Velazquez E, et al. (2006). Burkholderia ferrariae sp. nov., isolated from an iron ore in Brazil. Int. J. Syst. Evol. Microbiol. 56: 2421-2425.
http://dx.doi.org/10.1099/ijs.0.64498-0
PMid:17012573
Vandamme P, Goris J, Chen WM, De Vos P, et al. (2002). Burkholderia tuberum sp. nov. & Burkholderia phymatum sp. nov., nodulate the roots of tropical legumes. Syst. Appl. Microbiol. 25: 507-512.
http://dx.doi.org/10.1078/07232020260517634
PMid:12583710
Vandamme P, Opelt K, Knochel N, Berg C, et al. (2007). Burkholderia bryophila sp. nov. and Burkholderia megapolitana sp. nov., moss-associated species with antifungal and plant-growth-promoting properties. Int. J. Syst. Evol. Microbiol. 57: 2228-2235.
http://dx.doi.org/10.1099/ijs.0.65142-0
PMid:17911288
Viallard V, Poirier I, Cournoyer B, Haurat J, et al. (1998). Burkholderia graminis sp. nov., a rhizospheric Burkholderia species, and reassessment of [Pseudomonas] phenazinium, [Pseudomonas] pyrrocinia and [Pseudomonas] glathei as Burkholderia. Int. J. Syst. Bacteriol. 48 Pt 2: 549-563.
http://dx.doi.org/10.1099/00207713-48-2-549
PMid:9731297
Wong-Villarreal A and Caballero-Mellado J (2010). Rapid identification of nitrogen-fixing and legume-nodulating Burkholderia species based on PCR 16S rRNA species-specific oligonucleotides. Syst. Appl. Microbiol. 33: 35-43.
http://dx.doi.org/10.1016/j.syapm.2009.10.004
PMid:19945811
Zhang H, Hanada S, Shigematsu T, Shibuya K, et al. (2000). Burkholderia kururiensis sp. nov., a trichloroethylene (TCE)- degrading bacterium isolated from an aquifer polluted with TCE. Int. J. Syst. Evol. Microbiol. 50 Pt 2: 743-749.
http://dx.doi.org/10.1099/00207713-50-2-743
PMid:10758884
Zhang L and Xie G (2007). Diversity and distribution of Burkholderia cepacia complex in the rhizosphere of rice and maize. FEMS Microbiol. Lett. 266: 231-235.
http://dx.doi.org/10.1111/j.1574-6968.2006.00530.x
PMid:17233735