Publications

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2012
M. E. Ali, Hashim, U., Kashif, M., Mustafa, S., Man, Y. B. Che, and Hamid, S. B. Abd, Development of swine-specific DNA markers for biosensor-based halal authentication, vol. 11, pp. 1762-1772, 2012.
Aboud MJ, Gassmann M and McCord BR (2010). The development of mini pentameric STR loci for rapid analysis of forensic DNA samples on a microfluidic system. Electrophoresis 31: 2672-2679. http://dx.doi.org/10.1002/elps.201000032 PMid:20665925   Ali ME, Hashim U, Dhahi TS, Mustafa S, et al. (2011a). Analysis of pork adulteration in commercial burgers targeting porcine-specific mitochondrial cytochrome B gene by TaqMan probe real-time polymerase chain reaction food. Food Anal. Methods DOI: 10.1007/s12161-011-9311-4. http://dx.doi.org/10.1007/s12161-011-9311-4   Ali ME, Hashim U, Mustafa S and Che Man YB (2011b). Swine-specific PCR-RFLP assay targeting mitochondrial cytochrome B gene for semiquantitative detection of pork in commercial meat products. Food Anal. Methods 5: 613-623. http://dx.doi.org/10.1007/s12161-011-9290-5   Ali ME, Hashim U, Mustafa S, Che Man YB, et al. (2011c). Nanoparticle sensor for label free detection of swine DNA in mixed biological samples. Nanotechnology DOI: 10.1088/0957-4484/22/19/195503. http://dx.doi.org/10.1088/0957-4484/22/19/195503   Ali ME, Hashim U, Mustafa S, Che Man YB, et al. (2011d). Nanobiosensor for detection and quantification of DNA sequences in degraded mixed meats. J. Nanomater. DOI: 10.1155/2011/781098. http://dx.doi.org/10.1155/2011/781098   Ali ME, Hashim U, Mustafa S, Man YBC, et al. (2011e). Nanobiosensor for the detection and quantification of specific DNA sequences in degraded biological samples. IFMBE Proceed. 35: 384-387. http://dx.doi.org/10.1007/978-3-642-21729-6_99   Ali ME, Hashim U, Mustafa S, Che Man YB, et al. (2012). Gold nanoparticle sensor for the visual detection of pork adulteration in meatball formulation. J. Nanomater. DOI: 10.1155/2012/103607. http://dx.doi.org/10.1155/2012/103607   Bielikova M, Pangallo D and Turna J (2010). Polymerase chain reaction - restriction fragment length polymorphism (PCR-RFLP) as a molecular discrimination tool for raw and heat-treated game and domestic animal meats. J. Food Nutr. Res. 49: 134-139.   Butler JM (2005). Forensic DNA Typing-Biology, Technology and Genetics of STR markers. 2nd edn. Elsevier, New York.   Butler JM (2006). MiniSTRs: Past, Present, and Future. October 2006. Forensic News, Applied Biosystems, Foster City.   Che Man YB, Mustafa S, Khairil Mokhtar NF, Nordin R, et al. (2010). Porcine-specific polymerase chain reaction assay based on mitochondrial D-loop gene for the identification of pork in raw meat. Int. J. Food Proper. 15: 134-144. http://dx.doi.org/10.1080/10942911003754692   Doosti A, Ghasemi Dehkordi P and Rahimi E (2011). Molecular assay to fraud identification of meat products. J. Food Sci. Technol. DOI: 10.1007/s13197-011-0456-31-5.   Dubertret B, Calame M and Libchaber AJ (2001). Single-mismatch detection using gold-quenched fluorescent oligonucleotides. Nat. Biotechnol. 19: 365-370. http://dx.doi.org/10.1038/86762 PMid:11283596   Gerion D, Parak WJ, Williams SC, Zanchet D, et al. (2002). Sorting fluorescent nanocrystals with DNA. J. Am. Chem. Soc. 124: 7070-7074. http://dx.doi.org/10.1021/ja017822w PMid:12059231   Hill CR, Coble MD and Butler JM (2006). Development of 27 New MiniSTR Loci for Improved Analysis of Degraded DNA Samples. American Academy of Forensic Sciences, February 24, 2006, Poster B2105, Seattle.   Hird H, Chisholm J, Sanchez A, Hernandez M, et al. (2006). Effect of heat and pressure processing on DNA fragmentation and implications for the detection of meat using a real-time polymerase chain reaction. Food Addit. Contam. 23: 645-650. http://dx.doi.org/10.1080/02652030600603041 PMid:16751140   Kim C-H, Jung C, Lee K-B, Park HG, et al. (2011). Label-free DNA detection with a nanogap embedded complementary metal oxide semiconductor. Nanotechnology DOI: 10.1088/0957-4484/22/13/135502. http://dx.doi.org/10.1088/0957-4484/22/13/135502   Luo A, Zhang A, Ho S, Xu W, et al. (2011). Potential efficacy of mitochondrial genes for animal DNA barcoding: a case study using eutherian mammals. BMC Genomics 12: 84. http://dx.doi.org/10.1186/1471-2164-12-84 PMid:21276253 PMCid:3042414   Maxwell DJ, Taylor JR and Nie S (2002). Self-assembled nanoparticle probes for recognition and detection of biomolecules. J Am. Chem. Soc. 124: 9606-9612. http://dx.doi.org/10.1021/ja025814p PMid:12167056   Mirkin CA, Letsinger RL, Mucic RC and Storhoff JJ (1996). A DNA-based method for rationally assembling nanoparticles into macroscopic materials. Nature 382: 607-609. http://dx.doi.org/10.1038/382607a0 PMid:8757129   Mozayani A and Noziglia C (2010). The Forensic Laboratory Handbook - Procedures and Practice. Humana Press, Houston, 30-41.   Rohman A, Sismindari, Erwanto Y and Che Man YB (2011). Analysis of pork adulteration in beef meatball using Fourier transform infrared (FTIR) spectroscopy. Meat Sci. 88: 91-95. http://dx.doi.org/10.1016/j.meatsci.2010.12.007 PMid:21227596   Smith S, Vigilant L and Morin PA (2002). The effects of sequence length and oligonucleotide mismatches on 5' exonuclease assay efficiency. Nucleic Acids Res. 30: e111. http://dx.doi.org/10.1093/nar/gnf110 PMid:12384613 PMCid:137155   Srisombat LO, Park JS, Zhang S and Lee TR (2008). Preparation, characterization, and chemical stability of gold nanoparticles coated with mono-, bis-, and tris-chelating alkanethiols. Langmuir 24: 7750-7754. http://dx.doi.org/10.1021/la800511g PMid:18620437   Wu JH, Hong PY and Liu WT (2009). Quantitative effects of position and type of single mismatch on single base primer extension. J. Microbiol. Methods 77: 267-275. http://dx.doi.org/10.1016/j.mimet.2009.03.001 PMid:19285527   Yusop M, Mustafa S, Che Man Y, Omar A, et al. (2011). Detection of raw pork targeting porcine-specific mitochondrial cytochrome B gene by molecular beacon probe real-time polymerase chain reaction. Food Anal. Methods DOI: 10. 1007/s12161-011-9260-y.