Publications
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, “Segregation analysis of microsatellite (SSR) markers in sugarcane polyploids”, vol. 14, pp. 18384-18395, 2015.
, “Use of simple sequence repeat markers for DNA fingerprinting and diversity analysis of sugarcane (Saccharum spp) cultivars resistant and susceptible to red rot”, vol. 11, pp. 1195-1204, 2012.
Brown JS, Schnell RJ, Power EJ, Douglas SL, et al. (2007). Analysis of clonal germplasm from five Saccharum species: S. barberi, S. robustum, S. officinarum, S. sinense and S. spontaneum. A study of inter- and intraspecies relationships using microsatellite markers. Genet. Res. Crop Evol. 54: 627-648.
http://dx.doi.org/10.1007/s10722-006-0035-z
Chen PH, Pan YB, Chen RK and Xu LP (2009). SSR marker-based analysis of genetic relatedness among sugarcane cultivars (Saccharum spp. hybrids) from breeding programs in China and other countries. Sugar Tech. 11: 347-354.
http://dx.doi.org/10.1007/s12355-009-0060-2
Chen X, Temnykh S, Xu Y and Cho YG (1997). Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.). Theor. Appl. Genet. 95: 553-567.
http://dx.doi.org/10.1007/s001220050596
Cordeiro GM, Taylor GO and Henry RJ (2000). Characterisation of microsatellite markers from sugarcane (Saccharum sp.), a highly polyploid species. Plant Sci. 155: 161-168.
http://dx.doi.org/10.1016/S0168-9452(00)00208-9
Cordeiro GM, Pan YB and Henry RJ (2003). Sugarcane microsatellites for the assessment of genetic diversity in sugarcane germplasm. Plant Sci. 165: 181-189.
http://dx.doi.org/10.1016/S0168-9452(03)00157-2
D'Hont A, Grivet L, Feldmann P, Rao S, et al. (1996). Characterisation of the double genome structure of modern sugarcane cultivars (Saccharum spp.) by molecular cytogenetics. Mol. Gen. Genet. 250: 405-413.
http://dx.doi.org/10.1007/BF02174028
PMid:8602157
Doyle JJ and Doyle JL (1990). Isolation of plant DNA from fresh tissue. Focus 12: 13-15.
Garcia AA, Kido EA, Meza AN and Souza HM (2006). Development of an integrated genetic map of a sugarcane (Saccharum spp.) commercial cross, based on a maximum-likelihood approach for estimation of linkage and linkage phases. Theor. Appl. Genet. 112: 298-314.
http://dx.doi.org/10.1007/s00122-005-0129-6
PMid:16307229
Glynn NC, Mccorkle K and Comstock JC (2009). Diversity among mainland USA sugarcane cultivars examined by SSR genotyping. Am. Soc. Sugar Cane Technol. 29: 36-52.
Goldstein DB and Schlotterer C (1999). Microsatellites: Evolution and Applications. Oxford University Press, Oxford.
Harvey M and Botha FC (1996). Use of PCR-based methodologies for the determination of DNA diversity between Sacchrum varieties. Euphytica 89: 257-265.
http://dx.doi.org/10.1007/BF00034614
Hoarau JY, Grivet L, Offmann B, Raboin LM, et al. (2002). Genetic dissection of a modern sugarcane cultivar (Saccharum spp.). II. Detection of QTLs for yield components. Theor. Appl. Genet. 105: 1027-1037.
http://dx.doi.org/10.1007/s00122-002-1047-5
PMid:12582930
Jannoo N, Grivet L, Seguin M and Paulet F (1999). Molecular investigation of the genetic base of sugarcane cultivars. Theor. Appl. Genet. 99: 171-184.
http://dx.doi.org/10.1007/s001220051222
Jeffreys AJ, Wilson V and Thein SL (1985). Individual-specific 'fingerprints' of human DNA. Nature 316: 76-79.
http://dx.doi.org/10.1038/316076a0
PMid:2989708
Korkovelos AE, Mavromatis AG, Huang WG, Hagidimitriou M, et al. (2008). Effectiveness of SSR molecular markers in evaluating the phylogenetic relationships among eight Actinidia species. Sci. Hortic. 116: 305-310.
http://dx.doi.org/10.1016/j.scienta.2008.01.011
Lima ML, Garcia AA, Oliveira KM, Matsuoka S, et al. (2002). Analysis of genetic similarity detected by AFLP and coefficient of parentage among genotypes of sugar cane (Saccharum spp.). Theor. Appl. Genet. 104: 30-38.
http://dx.doi.org/10.1007/s001220200003
PMid:12579425
Liu ZW, Biyashev RB and Saghai-Maroof MA (1996). Development of simple sequence repeat DNA markers and their integration into a barley linkage map. Theor. Appl. Genet. 93: 869-876.
http://dx.doi.org/10.1007/BF00224088
Lu YH, D'Hont A, Paulet F and Grivet L (1994). Molecular diversity and genome structure in modern sugarcane varieties. Euphytica 78: 217-226.
http://dx.doi.org/10.1007/BF00027520
Miller JD, Glaz B, Tai PYP, Comstock JC, et al. (2005). Genetic contribution to yield gains in the Florida sugarcane industry across 33 years. Crop Sci. Am. 45: 92-97.
http://dx.doi.org/10.2135/cropsci2005.0092
Nair NV, Selvi A, Sreenivasn TV and Pushpalatha KN (2002). Molecular diversity in Indian sugarcane cultivars as revealed by random amplified DNA polymorphism. Euphytica 127: 219-225.
http://dx.doi.org/10.1023/A:1020234428681
Pan YB, Cordeiro GM, Richard Jr EP and Henry RJ (2003a). Molecular genotyping of sugarcane clones with microsatellite DNA markers. Maydica 48: 319-329.
Pan YB, Miller JD, Schnell RJ and Richard J (2003b). Application of microsatellite and RAPD fingerprints in the Florida sugarcane variety program. Sugar Cane Int. 19-28.
Pan YB, Tew TL, Schnell RJ and Viator RP (2006). Microsatellite DNA marker-assisted selection of Saccharum spontaneum cytoplasm-derived germplasm. Sugar Tech. 8: 23-29.
http://dx.doi.org/10.1007/BF02943737
Pan YB, Scheffler BS and Richard JEP (2007). High-throughput genotyping of commercial sugarcane clones with microsatellite (SSR) DNA markers. Sugar Tech. 9: 176-181.
Pestsova E, Ganal MW and Roder MS (2000). Isolation and mapping of microsatellite markers specific for the D genome of bread wheat. Genome 43: 689-697.
http://dx.doi.org/10.1139/g00-042
PMid:10984182
Pinto LR, Oliveira KM, Marconi T and Garcia AAF (2006). Characterization of novel sugarcane expressed sequence tag microsatellites and their comparison with genomic SSRs. Plant Breed. 125: 378-384.
http://dx.doi.org/10.1111/j.1439-0523.2006.01227.x
Pinto LR, Leite DC, Favero TM, Pastina MM, et al. (2011). Identification of microsatellites markers associated with yield components and quality parameters in sugarcane. Int. Sugar J. 113: 56-60.
Piperidis G, Taylor GO and Smith GR (2001). A microsatellite marker database for fingerprinting sugarcane clones. XXIV Proc. Int. Soc. Sugar Cane Technol.632-633.
Powell W, Machray GC and Provan J (1996). Polymorphism revealed by simple sequence repeats. Trends Plant Sci. 1: 215-222.
Prevost A and Wilkinson MJ (1999). A new system of comparing PCR primers applied to ISSR fingerprinting. Theor. Appl. Genet. 98: 107-112.
http://dx.doi.org/10.1007/s001220051046
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Sharopova N, McMullen MD, Schultz L, Schroeder S, et al. (2002). Development and mapping of SSR markers for maize. Plant Mol. Biol. 48: 463-481.
http://dx.doi.org/10.1023/A:1014868625533
PMid:12004892
Silva J and Bressiani J (2005). Sucrose synthase molecular marker associated with sugar content in elite sugarcane progeny. Genet. Mol. Biol. 28: 294-298.
http://dx.doi.org/10.1590/S1415-47572005000200020
Singh RK, Singh P, Misra P and Singh SP (2005). STMS marker for tagging high sugar genes in sugarcane. Sugar Tech. 7: 74-76.
http://dx.doi.org/10.1007/BF02942534
Smith JSC, Chin ECL, Shu H, Smith OS, et al. (1997). An evaluation of the utility of SSR loci as molecular markers in maize (Zea mays L.): comparisons with data from RFLPs and pedigree. Theor. Appl. Genet. 95: 163-173.
http://dx.doi.org/10.1007/s001220050544
Zhang D, Mischke S, Goenaga R and Hemeida AA (2006). Accuracy and reliability of high-throughput microsatellite genotyping for Cacao clone identification. Crop Sci. 46: 2084-2092.
http://dx.doi.org/10.2135/cropsci2006.01.0004