Research Article

Related GMR Articles

08/01/2014
Carassius auratus var. Pingxiangnensis; Complete mitochondrial DNA sequence; Molecular characteristics; Phylogenetic analysis; Ploidy

Carassius auratus var. pingxiangnensis is a natural triploid crucian carp mutant. In order to understand its placement and genetic background at the gene level, the characteristics of mitochondrial DNA sequences and phylogenetic relationship were examined. The results showed that the mitochondrial DNA is a circular double-stranded DNA molecule that is 16,576 bp in ... more

J.Q. Sheng; J.H. Wang; S.H. He; L.G. Zeng; K. Peng; Y.J. Hong
04/29/2014
Eukaryotic translation initiation factor 4A protein; Phylogenetic analysis; Sequence variation; Toxoplasma gondii; Toxoplasmosis

Toxoplasma gondii is an opportunistic protozoan parasite that infects a wide range of animals, including humans. The T. gondii eukaryotic translation initiation factor 4A (eIF4A) protein is expressed in the tachyzoite, but its expression is markedly downregulated in the bradyzoite, and it is therefore considered to be associated with tachyzoite virulence. The present ... more

J. Chen; S.F. Fang; D.H. Zhou; Z.Y. Li; G.H. Liu; X.Q. Zhu
04/14/2014
Marmota himalayana; Mitochondrial genome; Phylogenetic analysis; Rodentia

This is the first report of a complete mitochondrial genome sequence from Himalayan marmot (Marmota himalayana, class Marmota). We determined the M. himalayana mitochondrial (mt) genome sequence by using long-PCR methods and a primer-walking sequencing strategy with genus-specific primers. The complete mt genome of M. himalayana was 16,443 bp in length and ... more

Q.J. Chao; Y.D. Li; X.X. Geng; L. Zhang; X. Dai; X. Zhang; J. Li; H.J. Zhang
01/21/2014
Betaine aldehyde dehydrogenase; Phylogenetic analysis; Safflower; Secondary structure; Subcellular localization

In response to salinity or drought stress, many plants accumulate glycine betaine, which is a regulator of osmosis. In plants, the last step in betaine synthesis is catalyzed by betaine aldehyde dehydrogenase (BADH), a nuclear-encoded chloroplastic enzyme. Based on the conserved oligo amino acid residues of the published BADH genes from other higher plant species, a cDNA sequence ... more

Y.B. Wang; L.L. Guan; Y.W. Xu; H. Shen; W. Wu
05/04/2015
African swine fever virus; Asfarviridae; B646L; Phylogenetic analysis

African swine fever virus (ASFV) outbreak has been considered as an emerging and re-emerging disease for almost a century. Diagnostically, simple polymerase chain reaction and sequencing-based molecular detection could be employed for both viral identification and genotyping. This study established a novel phylogenetic analysis and epidemiology comparison based on 205 bp of p72 ... more

Y. Muangkram; M. Sukmak; W. Wajjwalku
03/30/2015
Amplified fragment length polymorphism; Bupleurum; Chaihu; Genetic diversity; Phylogenetic analysis; Radix bupleuri

Radix bupleuri (Chaihu), the dried root of the Bupleurum plant, is an important component of traditional Chinese medicine. In this study, we examined the genetic diversity of 11 Bupleurum strains, originating from 7 provinces in China, using amplified fragment length polymorphism analysis. A total of 274 polymorphic bands were obtained using 6 primer ... more

S.Y. Ke; L.L. Shi; Y.Z. Ma; X.J. Zhou
03/27/2015
Chinese cabbage; Gene expression; Hsf; Interaction network; Phylogenetic analysis

Chinese cabbage (Brassica rapa ssp. pekinensis) is one of the most important vegetable crops grown worldwide, and various methods exist for selection, propagation, and cultivation. The entire Chinese cabbage genome has been sequenced, and the heat shock transcription factor family (Hsfs) has been found to play a central role in plant growth and development and in the ... more

X.Y. Huang; P. Tao; B.Y. Li; W.H. Wang; Z.C. Yue; J.L. Lei; X.M. Zhong
03/30/2015
All hermaphrodites; Phylogenetic analysis; Polymorphism; Simple sequence repeat

The papaya (Carica papaya L.) is one of the most important economic tropical fruits in the world, and the hermaphrodite is the preferred type in field cultures. We analyzed the sexual ratio of offspring from the cultivar ‘Taiwan Seed Station No. 7’ (T7) by a self-cross and its cross with Taichung Sunrise (TS). Female progeny from the T7 self-crossing were not observed. This ... more

C.T. Chiu; C.W. Wang; F.C. Chen; S.W. Chin; C.C. Liu; M.J. Lee; W.C. Chung; Y.W. Chien; H.J. Chang; C.Y. Lee
03/13/2015
Innate immunity; Macaca thibetana; Phylogenetic analysis; TLR4 gene; Toll-like receptor

In this study, the complete coding region sequence of an innate immune-related TLR4 gene was obtained from the Tibetan macaque (Macaca thibetana) genome via PCR and direct sequencing. The sequence had a total length of 2481 bp, contained 3 complete exons, and encoded 826 amino acids (AAs); its isoelectric point was 5.703, and the molecular weight was 94.72 kDa. The high ... more

Q.X. Dai; Y.F. Yao; Z.C. Qi; Y. Huang; Q.Y. Ni; M.W. Zhang; H.L. Xu
02/02/2015
Ganoderma identification and classification; Ganoderma spp; Mitochondrial small subunit rDNA; Phylogenetic analysis

Ganoderma mushroom is one of the most prescribed traditional medicines and has been used for centuries, particularly in China, Japan, Korea, and other Asian countries. In this study, different strains of Ganoderma spp and the genetic relationships of the closely related strains were identified and investigated based on the V4-V6 region of mitochondrial small subunit ... more

X.W. Zhou; K.Q. Su; Y.M. Zhang

Pages