Technical Note

Related GMR Articles

12/10/2013
Microsatellite; Oplegnathus fasciatus; Polymorphism

The rock bream fish Oplegnathus fasciatus is one of the most popular aquaculture species in China. In the present study, 15 novel polymorphic microsatellite loci were isolated and characterized from a wild population of O. fasciatus from the Zhoushan coast of China. The number of alleles per polymorphic locus ranged from 4 to 9 in a sample of 30 individuals. Observed and ... more

X.X. Sun; D.D. Xu; B. Lou; S.L. Li; W. Zhan; Y.R. Zhang; J. Xin
12/04/2013
Microsatellite; Nibea albiflora; Polymorphism

Eleven novel microsatellite loci were isolated from a (CA)10-enriched genomic DNA library of Nibea albiflora. The characteristics of these microsatellites were determined in a sample of 48 N. albiflora individuals. The number of alleles at the 11 microsatellite loci ranged from 5 to 25, with an average of 13.5 per locus. The observed and expected ... more

D.D. Xu; B. Lou; S.L. Li; Y.R. Zhang; J. Xin; W. Zhan
12/04/2013
Cluster; Fenugreek; Genetic diversity; Polymorphism; RFLP; SDS-PAGE

Protein and DNA polymorphismswere surveyed among seven accessions of wild fenugreek (Trigonellafoenum-graecum L.) to estimate their genetic diversity and relationships. Samples were obtained from diverse ecogeographical areas in Saudi Arabia and Yemen. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) analysis of seed storage protein showed genetic variations ... more

E.A. Haliem; A.A. Al-Huqail
11/22/2013
Microsatellite; Molecular markers; Polymorphism; Portunus trituberculatus

The Swimming crab Portunus trituberculatus (Portunidae) is an important economically food species. To provide molecular markers for P. trituberculatus, we isolated and characterized polymorphic microsatellite markers. We developed a 5'-anchored genomic library of P. trituberculatus DNA, and derived 45 positive clones. We designed 30 pairs of primers from the ... more

L.P. Ren; Y. Qin; X.C. Li; Y.N. Sun; R.X. Wang
05/14/2012
Microsatellite; Polymorphism; Taxus chinensis var. mairei

We isolated and characterized 11 microsatellite loci for the Chinese yew, Taxus chinensis var. mairei, an endangered tree species in China, by constructing a (CA)12-enriched library. The number of alleles per locus ranged from 5 to 10. The observed heterozygosities ranged from 0.2500 to 0.8333 and the expected heterozygosities ranged from 0.5196 to 0.8680. No ... more

H. Xue; C.H. Lu; X.B. Wu
08/15/2014
Genetic diversity; Microsatellites; Polymorphism; Sogatella furcifera

The whitebacked planthopper Sogatella furcifera (Horváth) (Hemiptera: Delphacidae) is one of the most harmful pests of rice. In this study, 18 polymorphic microsatellite markers were developed from S. furcifera genomic libraries using the fast isolation by amplified fragment length polymorphism of sequences containing repeat protocols. Microsatellite polymorphism was ... more

L. Zhang; G. Li; G.C. He; L.L. Zhu; R. Qin; S.L. Jing
05/16/2014
Genetic diversity; Inter-retrotransposon-amplified polymorphism; Polymorphism; Varietal discrimination

Manioc, Manihot esculenta, is economically important in many tropical and subtropical countries. The genetic variability of the species has not been fully explored, and new information may help expand its use. Molecular markers based on retrotransposons have good potential for analysis of genetic diversity given their abundance in the genome. Eight long terminal repeat ... more

A.M. Oliveira-Silva; G.F. Silva; M.C. Dias; C.R. Clement; N.R. Sousa
03/17/2014
Chinese muntjac; Microsatellite; Muntiacus reevesi; Polymorphism; Population genetics

Eight polymorphic microsatellite markers for Muntiacus reevesi were identified and characterized in this study. The number of alleles per locus ranged from 3 to 10 across 24-48 samples. The loci showed expected and observed heterozygosities of 0.577-0.876 and 0.387-0.933, respectively, with an average polymorphic information content value of 0.682. These markers should be a ... more

H. Wang; X. Luo; W.B. Shi; B.W. Zhang
06/11/2015
Microsatellite; Odontobutis potamophila; Polymorphism

We characterized 16 novel polymorphic loci isolated from a partial genomic DNA library of Odontobutis potamophila enriched for CA repeats. We tested the variability of these microsatellites on 51 unrelated individuals collected in China. All loci were polymorphic. The average allele number was 14.6 per locus, ranging from 2 to 27. The observed heterozygosity ranged from 0.35 to ... more

Y.B. Shen; D. Li; J.L. Li; R.Q. Wang; Y.F. Xuan
03/06/2015
Date palm; Genetic diversity; Microsatellite markers; Phoenix dactylifera L.; Polymorphism

The genetic diversity in the date palm germplasm of 59 female accessions representing 12 cultivars from different locations in Qatar was investigated using 14 loci of simple-sequence repeat (SSR) primers. A total of 94 alleles, with a mean of 6.7 alleles per locus, were scored. The number of alleles per locus varied from 3 (primer mPdCIR090) to 11 (primers mPdCIR010 and mPdCIR015). The ... more

K. Elmeer; I. Mattat

Pages