Research Article

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06/21/2011
Genetic diversity; Microsatellites; SSR markers; Wild sweet cherry

Wild sweet cherry (Prunus avium) trees are abundant in the northern part of Turkey, including the Coruh Valley. We analyzed 18 wild sweet cherry genotypes collected from diverse environments in the upper Coruh Valley in Turkey to determine genetic variation, using 10 SSR primers. These SSR primers generated 46 alleles; the number of alleles per primer ranged from 3 to 7, with a ... more

S. Ercisli; G. Agar; N. Yildirim; H. Karlidag; B. Duralija; A. Vokurka
03/09/2011
Curcuma longa L.; Genetic divergence; Genetic resources; Natural dye; SSR markers

Turmeric (Curcuma longa) is a triploid, vegetatively propagated crop introduced early during the colonization of Brazil. Turmeric rhizomes are ground into a powder used as a natural dye in the food industry, although recent research suggests a greater potential for the development of drugs and cosmetics. In Brazil, little is known about the genetic variability available for crop ... more

M.S. Sigrist; J.B. Pinheiro; J.A.Azevedo Filho; M.I. Zucchi
02/06/2013
Breeding; Genetic diversity; Phaseolus vulgaris; SSR markers

The identification of germplasm genetic variability in breeding programs of the common bean (Phaseolus vulgaris) is essential for determining the potential of each combination of parent plants to obtain superior genotypes. The present study aimed to estimate the extent of genetic diversity in 172 lines and cultivars of the common bean by integrating five tests of value for ... more

P.C.B. Cardoso; M.M. Veiga; I.P.P. de Menezes; P.A.M.R. Valdisser; T.C.O. Borba; L.C. Melo; M.J. Del Peloso; C. Brondani; R.P. Vianello
07/08/2013
+P; Gene location; Linkage analysis; Silkworm; SSR markers

In the silkworm, Bombyx mori, normal markings are mainly controlled by the +P gene, which is located on the second chromosome. Due to a lack of crossing over in females, reciprocal backcrossed F1 (BC1) progenies were used for linkage analysis and mapping of the +P gene based on an SSR linkage map using silkworm strains P50 and H9, which are ... more

G.Q. Wei; L. Yu; C.L. Liu; B.J. Zhu; H.J. Ding
11/12/2012
Bulked segregant analysis; Drought tolerance; QTL; SSR markers; Wheat

This study was carried out to evaluate the genetic effect of quantitative trait loci (QTLs) conferring drought tolerance in wheat. A population of 120 F2 individuals from the cross between the drought-tolerant S-78-11 and drought-sensitive Tajan cultivars were analyzed for their segregation under drought stress conditions. The relative water content under drought stress ... more

M.R.Naroui Rad; A. Kadir; M.Y. Rafii; H.Z.E. Jaafar; M.R. Naghavi
03/16/2012
Barley landraces; Genetic diversity; Hordeum vulgare; PIC; SSR markers

We analyzed the genetic diversity of 115 barley germplasms, including 112 landraces and three new barley cultivars grown in the Shanghai region, using a set of 11 SSR markers. Sixty-six alleles were observed at the 11 SSR loci, ranged from three to ten, with a mean of six alleles per locus. The polymorphism information content ranged from 0.568 to 0.853, with a mean of 0.732, indicating ... more

Z.W. Chen; R.J. Lu; L. Zou; Z.Z. Du; R.H. Gao; T. He; J.H. Huang
01/09/2012
Carrapateira; Population genetics; Rutaceae; SSR markers; Tropical forest species

Metrodorea nigra (Rutaceae) is an endemic Brazilian tree of great ecological importance, frequently found in the submontane regions of ombrophilous dense and semideciduous forests. This tree is useful for reforesting degraded areas and the wood can be employed in construction. We developed 12 microsatellite markers from a genomic library enriched for GA/CA repeats, for this ... more

M.C. Guidugli; R. Ferreira-Ramos; A.C.B. de Sousa; F.W. Cidade; T.G. Marconi; M.A. Mestriner; M. Groppo; A.L. Alzate-Marin
07/24/2014
Dipterocarpus alatus; Genetic variation; Species conservation; SSR markers

Dipterocarpus alatus (Dipterocarpaceae) is widely distributed in lowland forests in central and southern Vietnam, Cambodia, Laos, Myanmar, Philippines, Thailand, and India. Due to over-exploitation and habitat destruction, the species is now threatened. The genetic variation within and among populations of D. alatus was investigated on the basis of 9 microsatellite ( ... more

N.M. Tam; V.D. Duy; N.M. Duc; V.D. Giap; B.T.T. Xuan
07/24/2014
Microsatellite markers; Orchid identification; SSR markers; Vandaceous orchids

Vandaceous orchids are a group of orchid genera in the subfamily Vandoideae. Among this group, Mokara, Phalaenopsis, and Vanda are the most popular and commercially important orchids in Thailand. Novel microsatellite markers were developed from Mokara, the intergeneric hybrid from 3 genera Vanda, Ascocentrum, and Arachnis by ... more

S. Peyachoknagul; C. Nettuwakul; P. Phuekvilai; S. Wannapinpong; K. Srikulnath
03/24/2014
Breeding program; Elite cultivars; Genetic diversity; Phaseolus vulgaris; SSR markers

Analysis of DNA polymorphisms allows for the genetic identification and precise discrimination of species with a narrow genetic base such as common bean. The primary objectives of the present study were to molecularly characterize commercial common bean varieties developed at various research institutions using microsatellite markers and to determine the degree of genetic diversity among ... more

P.C.B. Cardoso; C. Brondani; I.P.P. Menezes; P.A.M.R. Valdisser; T.C.O. Borba; M.J. Del Peloso; R.P. Vianello

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