Research Article

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07/27/2015
Atrina pectinata; Fragment length polymorphism; Genetic markers; Microsatellite; Sequence containing repeats

The pen shell, Atrina pectinata, is an economically valuable species that is widely distributed along the coastal waters of temperate and tropical areas, mainly growing in the Indian and Pacific Oceans. Eight novel microsatellite loci from the genome of A. pectinata were developed using fast isolation by amplified fragment length polymorphism of sequence containing ... more

Y.F. Ning; Z.B. Li; J.B. Shangguan; Y.S. Huang; P.D. Jiang; A.L. Xu; Y. Yuan
12/29/2017
Martes flavigula; Microsatellite; Next-generation sequencing; Population genetics

The yellow-throated marten (Martes flavigula Boddaert 1785) is a medium-sized carnivore and a top predator in South Korea that is distributed throughout Western and Southeast Asia and Siberia in a wide range of habitats. In this study, we developed a panel of polymorphic microsatellite markers for M. flavigula by Illumina next-generation sequencing for ... more

M.Yeong Lee; H.Chang Moon; H.Sook Jeon; E.Geun Song; D. Woo; H.B. Park; T.Young Choi; K.Yeon Eo; Y. Hyun; K. Lee; Y.Seok Park; J.Young Moon; H.Jin Han; J. An
08/10/2015
Genetic distance; Genetic diversity; Genetic similarity; Genetic structure; Microsatellite; Siniperca chuatsi

In order to provide genetic information for the selective breeding of Siniperca chuatsi, 14 microsatellite DNA loci were used to evaluate the genetic diversity and structure of four farmed populations and one wild population in China. The four cultivated populations were Foshan (FS), Jiangmen (JM), Nanjing (NJ), and Hongze Lake (HZL), and the wild population was collected from the ... more

C.F. Sun; X. Ye; Y.Y. Tian; J.J. Dong
08/07/2015
Association analysis; Genetic diversity; Growth traits; Mandarin fish; Microsatellite

Mandarin fish (Siniperca chuatsi) is a traditionally cultured freshwater fish with high commercial value in China. To facilitate marker-assisted selection for genetic improvement of this species, 100 microsatellite markers identified in previous studies were characterized in the 25 largest and 25 smallest individuals. Twenty polymorphic loci were used to genotype 200 individuals ... more

T.L. Yi; L. Fang; X.F. Liang; L.F. Sun; J. Li; X.N. Luo; W.J. Guo; Y.Q. Dou; J. Sun
12/29/2015
Genetic diversity; Growth traits; Mandarin fish; Microsatellite

The mandarin fish (Siniperca chuatsi) is a traditionally cultured freshwater fish with high commercial value in China. To facilitate marker-assisted selection in genetic improvement of this species, 120 microsatellite markers from the literature were characterized in the 25 largest and 25 smallest individuals. Eighteen polymorphic loci were then used to genotype 200 individuals, ... more

L.F. Sun; J. Li; X.F. Liang; T.L. Yi; L. Fang; J. Sun; Y.H. He; X.N. Luo; Y.Q. Dou; M. Yang
10/30/2015
Gekko japonicus; Genetic diversity; Microsatellite; Polymorphism

Twelve polymorphic microsatellite loci were isolated in the Japanese gecko, Gekko japonicus. We genotyped one population from Wenzhou, Zhejiang Province, China (N = 36). The mean number of observed alleles per locus was 7.3 (range 4 to 13). Observed and expected heterozygosity values ranged from 0.200 to 0.944 and from 0.395 to 0.797, respectively. One locus (GJ20) showed ... more

L. Wei; W.W. Shao; H.B. Zhou; J. Ping; L.M. Li; Y.P. Zhang
10/21/2015
DNA marker; Genetic diversity; Microsatellite; Syzygium samarangense

Syzygium samarangense (Blume) Merr. & Perry (wax apple) is an important commercial fruit tree in Southeast Asia. Here, microsatellite markers were developed to evaluate genetic diversity and distinguish cultivars in this species. In total, 161 microsatellite loci with sufficient flanking sequences to design primer sets were isolated from wax apple using a magnetic bead- ... more

J.M. Lai; C.C. Tsai; C.R. Yen; Y.Z. Ko; S.R. Chen; I.S. Weng; Y.S. Lin; Y.C. Chiang
10/24/2016
Genetic diversity; Geographic populations; Microsatellite; Thais luteostoma

In this study, the genetic diversity in four geographic populations (Yushan Island, Zhoushan, Wenzhou, and Xiamen) of Thais luteostoma was analyzed using 21 microsatellite loci. The results of this study showed that the alleles obtained from different populations ranged from 2 to 8. The average number of alleles and effective alleles were 4.59 and 3.16, ... more

W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao; W. Li; H.F. Jiao; Z.H. Lin; Y.B. Bao
12/15/2017
Genetic diversity; genetic relationships; Microsatellite; Olea europaea; South-Eastern Tunisia
Tunisia is one of the most important olive growing
countries in the Mediterranean basin and it is classified in fourth rank on
world scale in terms of olive oil production. Since the emergence of the
modern oliviculture, the identification, the evaluation and conservation
of the local genetic resources have been considered as a priority in
... more
M. Ben Mohamed; S. Zelasco; S. Ben Ali; F. Guasmi; T. Triki; F.L. Conforti; K. Naziha
12/31/2019
Genetic diversity; Germplasm; Lima bean; Microsatellite; Phaseolus lunatus; Structure

The lima bean (Phaseolus lunatus) has been cultivated in Brazil since pre-colonization times and remains an important source of food and income for small farmers. Nevertheless, the species has not been extensively studied in this country. We assessed the genetic diversity of 183 lima bean landraces collected from different regions of Brazil, maintained by ... more

R.N.O. Silva; A.C.A. Lopes; R.L.F. Gomes; J.G. Pádua; M.L. Burle

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